AMCG00016526


Basic Information

Item Value
gene id AMCG00016526
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 24215947 ~ 24243375 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016526
GCGGACTTCAGTCACCTTAGCGGTCGCGCTGCGTCGTGGTGAGCCCGGCCGCAGCCCCGCACAGGAGCGCAGCTGTGGTCCCTGGTCTCGGCTCGCTTTGTGCGTGTGAGCGCTTATGCAGCCTCTGCTTCTTTGCGCAATCGCGGCGCCTTTCAGTCCGCAGACTAGATAGAACTGGATCAGACGGATGAGCGCAGCCGGCCACCTGAGCCGAAAGTAATTGCGCCGCGCAATGACGGCTCCTGAAATACGCAGCGGCGCCGCGGGCAGGGGACACTGCTGAAGGGACGGGTCCACGGACAGAGACGGGCACGAAACACAGCTAAACTCACACACAGGGACGGGAACCGGGGGCAAGGAGAAGAGCCACTCGCTGTTTGGAAAGCGTCATGGAGGTCTCTCCCTCTCAGCCCACTGCGGAGACCGGGGGCGATCATGCGGCCAGTGTGGTGGCCGGCGCCGGGGCGGACAGAGCGGACATCCCCAGCCCCAGCCTCCCGTCCAAGCAGCGCTCTCTGCGGGCGGTTTATGTGCTAAATGACGGGCTGAAGGCGGTGGCCGCGAACAGCCCCGAGTCGGGGGCTCTGCAGTGCCTGCAGCGGGCGTGCGACGCCGAGAGCGCCATCCTGACCACCCTGACCTTCGGCCGGCTGGACTTCGGGGAGACCACGGTCCTCGACACCTTCTACGATGCGGCGCAGTCGCTCAAGGATATGGTGACTCAAAAAAACACAGCCTCCAGTGGTAACTACTACTTCATCCCATATGTGATGACACCCAACAACGAGTACATGTGTTGTGAGAACGACGCACAGCGCCGGGCGTCCGAGTACATGCAGCCCAGCTGGGACAGCCTGCTGGGGCCTCTGTGTGTGCCGCTGGTGGAGCGCTTCATCAGCCTGCTGAAGGACATCCATGTCACATCATGTGCATCTTACAAGGACACTCTGCTGAATGACATCCGCAAAGCGAGGGACAAGTACCAGGGTGAGGAGCTGGCGAAGGAGCTGTCCCGCATCAAGCTGCGCATCGACAATACAGAGGTCCTCACCCAGGACATCGTCATGAATCTGCTCTTCTCCTACAGGGACATCCAGGACTATGATGCCATGGTGAAGCTGGTGCAGACCCTGGAGATGCTACCCACCTGTGACCTGGCAAACCAGCCAATGATCCAGTTCCACTTCGCCTTTGCTCTCAACAGgagGAACAGTCCAGGAGACAGGGAACAGGCTCTGGGCGTGATGCTGCAGGTGGTTCAGTCCTGTGATCACCCCGCCCCCGACATGTTCTGTCTCTGTGGACGCATCTACAAGGACATCTTCCTGGACAGCGACTGCAAGGACACCAAGAACAGGGACAATGCCATTCAGTGCTCCATCGAGCTGCGGAAGATAGGTGTGCGTCTGAACAGCCTTCTGGGTCGGAAGGGCAGTCTGGAGAAAATGAACAACTACTGGGATGTGGGCCAATTCTTCACCAAGCAGAACCTGGAGCACTCGCCCCAGCGGGAGCGGCTCAACTTCTGGATGGACATCATCGTGGAGGCCACTCGAGAGACGACCAACGGCCTGCGATTCCCGGTACTGATACTGGAGCCCACAAAGATCTATCAGCCATCCTACGTCTGCATCAACAGTGAAGCGGAGGAGAAGAATGTCTCCATCTGGCACGTCTCCCCGTCAGAAACGAAAGGGATCCACGAGTGGAATTTCACAGCCACCTCTATCAAGGGAATAAGTATATCCAAGTTCGACGAGCGCTGCTGCTTCCTGTACGTCCACGACAACTCGGATGACTTCCAGATCTACTTCTCCACCGAGGACCAGTGTGGCAGGTTCTGCTCCATGGTGAAGGAGGTCATCTCAGACGGCTCGGGGAACGCAGTGGAGCTGGAAGGGGAAGCTGACGGAGACACACTGGAGGTGCGCATTGCCATCAAGGAGATacctgagagagacagcagGTACTCCCAACCCCTGCATGAGGAGATCGCCCTGCACAAGTACCTGAAGCACAGGAACATCGTGCAGTACCTGGGCTCTATCCTGGAGGGGCTGCGCTACCTGCACGAGAACCAGATCGTCCACAGGGACATCAAGGGGGACAATGTGCTGGTGAACACATACAGTGGGGTGCTGAAGATATCCGACTTTGGGACGTCCAAGCGGCTGGCGGGGGTCAACCCCTGCACTGAGACCTTCACCGGCACGCTGCAGTATATGGCCCCAGAGATCATAGACAAGGGCCCGCGGGGGTATGGCGCCCCGGCGGATATCTGGTCCCTGGGCTGCACCATCATTGAGATGGCCACGGGCAAGCCACCCTTTCACGAGCTGGGGGAGCCGCAGGCAGCCATGTTCAAGGTGGGGATGTTTAAGATCCACCCGGAGATCCCAGAGTCCCTCTCTGTCGAGGCCAAGTCCTTCATCCTGCGCTGCTTCGAGCCCGACCCCAACAAACGGGCCACAGCCACTGATCTGCTGAAGGACTCTTTCGTCCGGCACAACGTCAAGGGCAAGAAGAACAAGATCGCCTTCAAACCCTCCGACTACATCCGCAGCGTGTCGCTCCCGGTGCAGATGCAGGGCGAGAGTgcgggcagcagcagcagcgagcATGGCTCTGTGTCGCCTGACTGCGACGTCAAGCACGACGTGTTCTTCGACAAGAAGAAGCGCTCCAACTCGGAGAACCTCATCAAGTCGCCCAGCTCCAACTTCCTCAGTGTCCCAGACGACGGCTCTGTGTCGGAGGACCGCAgcgcccccccctccccagagGACCGTGACGCCGGGCTGTTTCTGCTGAAGAAGGACAGTGAGCGCAGGGCCATCCTGTACAAGGTCCTGAACGAGGACCAGGACAAGGGCAGTGAGGAGTTGAAGCTGTCGGTTGACCACATCAAGCAGATCATCTGCATCCTGCGGGACTTCATCCGCTCGCCCGAGCGCCGCGTCATGGCAACCACCATCTCCAAACTCAAACTAGACCTGGACTTCGACAGCACCTCCATCAACCAGATACAGCTGGTGCTGTTCGGTTTCCAGGACTCGGTGAACAAGGTCCTGAGGAATCACCACATCAAGCCCCACTGGATGTTTGCCATGGACAACATCATCCGCAGGGCTGTACAGGCTGCAGTCACCATCCTCATCCCAGAGCTGCAGACTCACTTCGGCCCGGCGTCGGAGAGCGAGGGCGTGGACAAGGACGCAGACGATGTGGACGTGGAAGACGGGGAGTTCCCAGGCAACGACCCCGTGGCCCCTGAGGACCCCGGCCTCACCTCGGGCGTCAGCACCCTCAGCTCTGTGATGTCACATGACTCCCAGCGCCCGCACCACCCTCTGGGTGCCCAACTGGGCCGGCTCAAGCAGGAGACCAGCAGGTTGCTGGAGGACCTGGTCCAGAAGGAGAAGGAGTACCAGCTGGTCCTCAGACAGACACTGCAGCAGAGAGCCCATGAGCTGGAGCTCATCCGGGTCAAGTCCAGACCCACCGACATCCCAACTCCCTCCATATTCCACATCCCTGCGGATCTGGAAGCAGACAAGGAGCTGTCGGCCTGGCTGAAGGAGCATGGAGCTGACGCTGACACCATAGAGAGGTTTGTTGTGGAGGACTACACGCTCAATGATGTTCTCAATGATGTCACCAAAGACGACCTGCGATACCTGAGACTGCGGGGAGGCGTGCTGTGCCGGATATGGCGGGCCATCCAGAAGCACCGCAGCAAGGCGCTGAGGCTGCAGCAGAAGACTAGGAGCCCAGAGTATGATGAAACACGAAAGGAACACACGGAACATCCTGGACCAGAGCTGAGGACCCCTCTGGCATCGGAGGACTGA

Function

GO: NA

KEGG:

id description
K13986 MAP3K15; mitogen-activated protein kinase kinase kinase 15

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016526 True 3851 mRNA 0.60 30 24215947 24243375

Neighbor

gene id symbol gene type direction distance location
AMCG00016525 LOC107580614 coding downstream 2288 24197885 ~ 24213659 (-)
AMCG00016522 NA coding downstream 74333 24123436 ~ 24141614 (-)
AMCG00016521 atp6v1a,atp6v1ab,LOC107584963,LOC107654231,LOC107701669,LOC107591235 coding downstream 123347 24073442 ~ 24092600 (-)
AMCG00016524 NA coding downstream 147944 24063267 ~ 24068003 (-)
AMCG00016523 NA coding downstream 153345 24047820 ~ 24062602 (-)
AMCG00016528 NA coding upstream 3807 24247182 ~ 24249577 (-)
AMCG00016527 NA coding upstream 6742 24250117 ~ 24270251 (-)
AMCG00016533 NA coding upstream 47319 24290694 ~ 24304314 (-)
AMCG00016530 NA coding upstream 95069 24338444 ~ 24354199 (-)
AMCG00016532 NA coding upstream 112536 24355911 ~ 24363038 (-)
G14093 NA non-coding downstream 50527 24165157 ~ 24165420 (-)
G14092 NA non-coding downstream 68270 24147399 ~ 24147677 (-)
G14016 NA non-coding downstream 272569 23942044 ~ 23943378 (-)
G14015 NA non-coding downstream 274409 23941318 ~ 23941538 (-)
G14013 NA non-coding downstream 281480 23934166 ~ 23934467 (-)
G14171 NA non-coding upstream 92569 24335944 ~ 24336827 (-)
G14181 NA non-coding upstream 181789 24425164 ~ 24425498 (-)
G14213 NA non-coding upstream 358323 24601698 ~ 24602007 (-)
G14214 NA non-coding upstream 362733 24606108 ~ 24606321 (-)
G14218 NA non-coding upstream 372412 24615787 ~ 24618345 (-)
AMCG00016505 NA other downstream 330689 23864581 ~ 23885258 (-)
AMCG00016504 NA other downstream 353208 23841062 ~ 23862739 (-)
G13969 NA other downstream 515692 23699149 ~ 23700255 (-)
G13962 NA other downstream 760136 23455092 ~ 23455811 (-)
AMCG00016480 NA other downstream 3532923 20666142 ~ 20683024 (-)
AMCG00016531 NA other upstream 65881 24309256 ~ 24323458 (-)
AMCG00016538 smpx,LOC107721880,LOC107590224,LOC107663668,LOC107705278 other upstream 310317 24553692 ~ 24566956 (-)
G14305 NA other upstream 637773 24881148 ~ 24882098 (-)
AMCG00016562 rnf6 other upstream 764599 25007974 ~ 25015343 (-)
G14392 NA other upstream 837193 25080568 ~ 25083699 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000018_07011537_07045271 MAP3K15, MAP3K5 coding CI01000018 null 7010961 ~ 7045271 (+)