AMCG00016545


Basic Information

Item Value
gene id AMCG00016545
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 24762569 ~ 24786410 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016545
ATGCAGAAGGCCAGGACcccggctcggctcggctctgCTGCTGTCGTCAAAATGAACGTGGACGTGCCAGATTTCGGGGAGGCCGCTCCCTTCCTGCGCAAGAACGAGAAGGAGATAATGGTGCTGCAGACGGTGCCCTTCGAGGGCAAGAAGAAGTGCTGGATCCCCGACGACAGGGAGGCTTACGCAGAGGTCGAGATCATGGAGACTCTTGGGGACAAAGTGACCGTGATGACGGCTGATGGCCGGACGCTGCTGGTGAAGGAGGGGGACGTGCAGCAGATCAACCCACCCAAGTTCGATATGATGGAGGACATGGCCATGCTGACGCACCTGAACGAGGCGTCCGTGCTGCACAACCTGCGCCGCCGCTACGCCAATTGGATGATCTACACATACTCTGGGCTGTTCTGTGTCACGGTCAACCCGTACAAGTGGCTGCCGGTGTACAAGGCCGAGGTGATTTCGGGCTACAAGGGGAAGCGGCGCACGGAGATCCCTCCGCACATCTACGCCATCGCGGACAACGCCTACCACGACATGCTGCGCAATCGGGAGAATCAGTCCATGCTAATCACAGGGGAGTCCGGTGCTGGGAAGACGGTGAACACAAAGCGTGTCATCCAGTACTTCGCCACGGTGGCGGCCATCGGAGACGCGGCCGGCAAGAAGAACGGTAACCTGGAGGACCAGATCATTCAGGCCAACCCGGCACTGGAAGCTTTTGGCAACGCAAAGACCCTCCGAAACGACAACTCCTCCCGATTCgGTAAATTTATACGTATACATTTCGGACCGTCGGGGAAACTCTCCTCTGCAGACATTGAGATCTATTTGCTGGAGAAGTCGCGGGTGATCTTCCAGCAGCCAGGGGAGCGGGACTACCACATGTTCTACCAGATCCTGTCTGGGAGGAAGCCGGAGCTGCAGGAGATGCTACTGGTGTCCAACAATCCATACGACTTCCAGTTTTGCTCTCAGGGCGTGGTGACAGTGGACAACCTGGACGACGGAGAGGAGCTTCTGGCGACTGACGAGGCCATGGACATTCTGGGCTTCACCTCCGATGAGAAGTACAGCGCCTACAAGCTGACCGGAGCCATCATGCACTTTGGCAACATGAAGTTCAAGCAGAAGCCGAGGGAGGAGCAGGCGGAGGCGGACGGGACGGAAACTGTGTATGACCGCATGTTCAAATGGCTGGTGACGCGGATCAACCGGACCCTGGACACCAAGCTGCCCAGGCAGTTCTTCATCGGGGTGCTGGACATTGCCGGGTTTGAGATATTCGACGTCCCCTACAATATCAGCGGCTGgctggagaaaaacaaggacCCCCTGAACGAGACCGTGGTGGGGCTGTTTCAGAAGTCCGCGAGCAAACTGCTGGCGAGCCTCTTTGAGAACTACATCAGCGCTGACAGTGATCAGTCCAGCGAGAAAAAGCGCAAGAAAGGAGCTTCTTTCCAGACGGTGTCCTCCTTGCACAAGGAGAACCTCAACAAGCTGATGACGAACCTGAAGTCCACGGCCCCTCACTTTGTGCGCTGCATCATCCCTAATGAAACCAAGACTCCAGCCACGGGGGCAATGCCAGCACCTGAGAAACTTCACTCTGCCTCCTGCAGGTATCGGATCCTGAATGCCTATGCCATCCCGGAGGACAAATATGTGGACAGCAGGAAGGCAGTGGAGAAGCTCCTGGGCTCTCTGGACATCGACCACACCCAGTATCGCTTCGGCAACACCAAGGTGTTCTTTAAGGCGGGGCTCCTGGGGCTGCTGGAGGACATGAGGGACGAGAGGCTGGCCAAGGTCCTGACCATGATTCAGTCCAGAGCCAGGGGCAGGCTGATGCGCATGGAGTACCAAAAGATGCTTGATAGAAGGGAGGCTGTGCTGGTGATACAGTGGAACTTGCGCACCTTCATGGCGGTGAAGAACTGGTCCTGGCTGCGGCTCTTCTTCAAGATCAAGCCCCTGCTGAAGTcagcagagacagagaaggagatGGCCACGCTGAAGGAGGAGCACCAGCGACTACAGGAGACGCTGGAGAAGTGCGAGGGCCGCAGGCGGGAGCTGGAGGAGCGGCAGGTCTCTCTAATCCAGGAGAAGAATGACCTTTTGCTGCAGCTGCAGGCTGAGCAGGACACGCTGTCGGACGCGGAGGAACGCTCCGACCTGCTGATCAAGGCTAAGATCCAGATGGAGGCGCGGATGAAGGAGCTGGTGGAGCGcctggaagaggaggaagagaGCCTTGCTCCTCTTGACTCCCCCTTGTTCAGCATGTTCTCTCTTGTTTTCAAAGTCCTCCACTTCAGCAAGCTAGCAGAGCCACGTACTCGATGCTCATGCTCGGTCTGGCTCTTCCCCTTcttcagcctctctctctctgccctgcaGGTGAAGAACCTGGTGGAGGAGCTTTCAGGGCTGGAGGACACGGTGCTGCGACTGAGCCGGGAGAAGAAGGCCGTGCAGGACAGCCAGCAGCAGACCCTGGACGACCTGCAGGCTGAAGAGGAGAAggtcctctccctctccaagGCAAAGACCAAGCTGGAGCAGCAGCTGGATGACATGGAGGGCACACTGGACCAGGAGAAGAAGACACGAGTCGACCTGGAGAGAGTGAAGCGGCGGCTGGAGGGGGACCTAAAGCTGATGCACGAGAGCATCATGGACCTGGAGAACAACAAGCTACACCTGGAGGAGAAGCTGAAGAAGAATGAGTTTGAGATCAACCACCTGAACTCCAAGATTGATGAAGAGCAGGCGGTGGCCAGCCAGCTGCAGAAGACCATTAAAGAACTCCAGGCGCGCAtcgaggagctggaggaggaacTGGAGGCGGAACGGGCGTCCAGGGCGCAGGCGGAGAGGCAGCGAGGAGAGCTGGGCCGCGAGCTGGAGGAGCTGGCTGAGCGGCTGGAGGAGGCCGGGGGGGCCAGCTCCGCCCAGGCCGAGCTGAGCAAGAAGCGCGAGGCGGAGCTGCTGCGTCTGCGCCGGGACCTGGAGGAGGCCACGCTGCGGCACGAGTCCACGGCCGCGGCTCTCAGGAAGAAGCACGCCGACGCGGTGGCCGAGCTGGGGGAGCAGCTGGATGGCCTGCAGAGGGTGAAGCAGAAGCTCGAGAAGGAGAAGAGCGAGCTCAGGCTGGAGCTGGACGATGTGGTCTCCAACACGGCACAAGTCTCCAAGGCCAAGGCGCTCTCGGACAAGCTGTGCCGAACCTATGAAGACCAGCTGAGCGAGGCCAAGAGCCGCATCGAGGAGCTGACTCGCCAGGTGTCTGACCTCGGCACCCAGAGGAGCCGCTTGCTGACTGAGAACGGTGAAATGAGCCGACAGCTAGAAGACAAGGACGTCCTGATCAGCCAGCTGTCCAAGGGCAAGAACATCTTCACTCAACAGCTTGAGGACCTAAGGaggcagctggaggaggagaccaAGGCGAGGAGTGCTCTGGCCCACGGGCTACAGGCGGCGCGCCACGACGGGGATCTGCTGAGGGAGCAGTacgaggaggagctggaggcgCGGGCCGAGCTGCAGAGGCTGCTGTCCAAGGGCAACACGGAGGTGGCACAGTGGAGGAACAAATACGAGAGCGACGCCATCCAGAGGacagaggagctggaggaggccaagaagaAGCTGGCTGCTCGGCTGCAGGAGGCGGAGGAGAGTGTGGAGGCGGCGAACGCCAAGTGCTCGTCGCTGGAGAAGACACGCGGCCGCCTGCAGGGAGAGCTGGAGgacctgctgctgcagctggagCGGGCCAGCGCTGCGGCCGCCACCCTGGACAAGAGGCAGAGGAACTTTGACAAGGTGTTGGCCGAGTGGAAGATGAAGCATGAGGAGAGCCAGGCCGAGCTGGACGGGGCGCAGAGGGAGGCGCGCAGCTTGAGCACTGAGCTCTTCAAGCTCAGACACTCGTACGAGGAAGCCCTGGACGGCCTGGAGACCAcgaagagagagaacaagaacCTTCAAGAGGAGATTGCAGATCTGACCTACCAGATCAGTGACAAGATCAAAGCCCTGCATGAGATCGAGAAGATGAAGAAGCAGCTGGAGCAGGAGAAGATAGAAATCCACACTGCTTTGGAGGAAGCCGAGGCGGCTTTGGAACATGAGGAGAGCAAGACCCTGAGAGTGCAGCTGGAACTGTCCCAGATGAAGGCGGACTTTGAGAGGAAAGTTGCTGAAAAAGAGGAGGAAATTGAAAACTACAGGGGTAATTACCAGCGCTCCATAGAGGCCCTGCAGTCCGCCCTGGACGCCGAGACCAAGAGCAAGATGGAAGCGATGCGTCTGAAGAAGAAGATGGAGGGAGACCTGAATGAGATGGAGATCCAGCTGGGCCATGCCAGCCGCCAGGCCATTGAGGCGCAGAAGAACATGCGTGTGCAGCAGGCCCAGGTCAAGGAGCTGCAGGTGCAGGTGGACGAGCTGACCCAGGAGCGTGGTGACCTGAAGGAGCAGGGCTGTCTGGCAGAGCGGAGGTCAGTGCTGCTGCAGgcggagctggaggagctgagGGCCGCCCTGGAGCAGACGGAGCGCAGCCGCAAACTGGCTGAGCAGGAGCTGCTGGATCTCAGTGAGAGGAACACCAGCCTGATGAATCAGAAGAAGAAGCTGGACAGCGACATCACTCAGATGCAGCAGGAAGTGGACGAGGCCGTGGAGGAGAGGAAGAACGCGGAGGAGAAGGCCAAGAAAGCCATCAACGATGCTGCGGTGATATCGGAGGAGCTGAAGAAGGAGCAGCACACCTCCACCCACCTGGAGAGGATGAAGAAGAACATGGAGCAGACCATCAAGGACCTTCAGCACCGCCTGGACGAGGCTGAGCAGGTGGCCCTGAAGGGAGGCAAGAAGCAGATCCACAAGCTGGAGACTCGGGTTCGAGAGCTGGAGAGTGAGCTGGAGGCAGAGCAGCGGAGGCACGGCGAGGCGCTGAAAGGCCTCCGCAAACATGAGCGCCGCGTCAAGGAGCTCACCTTCCAGACTGAGGAGGACAAGAAGAACTTGGCcagggtgcaggagctggtGGACAAGCTGCAGCTGAAGGTGAAGAGCTATAAGAGGCAGGCCGAGCAGTCGGAGGAGCAGGCCACAGTGAACCTGGCCAAGTACAGGAAGGTGCAGCATGAGCTGGACGATGCCGAGGAGAGGGCAGAGGTCGCGGAGTCGCAGGTCAACAAGTTGAGGAGCAAGAGCAAGGACCTCGGGCCCAAGCTCCCTCCGCTGAGTGAATATACCAGCAGCCTCAACATTTGTCCCCCGTGCAGCAATCCTGGCTGCCCTTCTGAGTCCCGAGGCCAGCCCTGCTCTGCCCAGAGGGAGTGGGTGCTGCCTTGA

Function

GO: NA

KEGG:

id description
K17751 MYH6_7; myosin heavy chain 6/7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016545 True 5379 mRNA 0.59 38 24762569 24786410

Neighbor

gene id symbol gene type direction distance location
AMCG00016546 LOC108276628,LOC107663623 coding downstream 23447 24721189 ~ 24739122 (-)
AMCG00016539 NA coding downstream 212444 24548377 ~ 24550125 (-)
AMCG00016534 NA coding downstream 369714 24375867 ~ 24392855 (-)
AMCG00016535 eif1ax,EIF1AX,eif1axb,LOC105905255 coding downstream 386762 24372069 ~ 24375807 (-)
AMCG00016532 NA coding downstream 399531 24355911 ~ 24363038 (-)
AMCG00016550 NA coding upstream 3738 24790148 ~ 24800194 (-)
AMCG00016551 NA coding upstream 16326 24802736 ~ 24809912 (-)
AMCG00016552 NA coding upstream 89454 24875864 ~ 24878227 (-)
AMCG00016555 mtmr6,LOC104951663 coding upstream 97493 24883903 ~ 24894419 (-)
AMCG00016556 NA coding upstream 144407 24930817 ~ 24953633 (-)
G14222 NA non-coding downstream 78034 24683065 ~ 24684535 (-)
G14218 NA non-coding downstream 144224 24615787 ~ 24618345 (-)
G14214 NA non-coding downstream 156248 24606108 ~ 24606321 (-)
G14213 NA non-coding downstream 160562 24601698 ~ 24602007 (-)
G14181 NA non-coding downstream 337071 24425164 ~ 24425498 (-)
G14311 NA non-coding upstream 118711 24905121 ~ 24906546 (-)
G14400 NA non-coding upstream 335680 25122090 ~ 25122375 (-)
G14472 NA non-coding upstream 618485 25404895 ~ 25405101 (-)
G14487 rpl19,LOC101068736,LOC103368168 non-coding upstream 730579 25516989 ~ 25520096 (-)
G14496 NA non-coding upstream 756636 25543046 ~ 25545725 (-)
AMCG00016538 smpx,LOC107721880,LOC107590224,LOC107663668,LOC107705278 other downstream 195613 24553692 ~ 24566956 (-)
AMCG00016531 NA other downstream 439111 24309256 ~ 24323458 (-)
AMCG00016505 NA other downstream 877311 23864581 ~ 23885258 (-)
AMCG00016504 NA other downstream 899830 23841062 ~ 23862739 (-)
G13969 NA other downstream 1062314 23699149 ~ 23700255 (-)
G14305 NA other upstream 94738 24881148 ~ 24882098 (-)
AMCG00016562 rnf6 other upstream 221564 25007974 ~ 25015343 (-)
G14392 NA other upstream 294158 25080568 ~ 25083699 (-)
AMCG00016579 NA other upstream 478362 25264772 ~ 25277478 (-)
AMCG00016591 NA other upstream 626906 25413316 ~ 25420371 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_05365373_05384192 MYH7B, MYH7BA, MYH7BB coding CI01000001 null 5365162 ~ 5384238 (+)