AMCG00016551


Basic Information

Item Value
gene id AMCG00016551
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 24802736 ~ 24809912 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016551
ATGCTCACACACAAGTGCCCCTCTCCAGCAGGGCTGCACAGCTGTGGCCCAGGAGGCGCTTTGGAGTCACATCCCACTGCGCACTCCTACCCCGCCTCTGTGCTGGCTAACATGGAGCAGTGCGAGCACAGAGACTGCGTGATGGATTGCCCGATGTACCATGGAAGCATCAGCAGGCAGACCTGTGAGGAGCTGCTGTCCAAAAAGGGGAAGGACGGGAGCTTCTTAGTGCGGGATAGTGAGACCATCTCTGGAGCCATGTGTCTCTGCGTCTACAGACAGAAGACTGTCTACACATACCGAATCCTATCGACCCACAATGGCTATTTCACCTTGCAGGCATCTCCGGGGGTGGAAGAGAGATTCTTTAAGACTTTAACAGATCTGATTAACAACTACAAGAGACGTGGGCAAGGACTGGCATACCGGCTACGTCACCCAGTGAAAACAAAGAAGCCGCCGGTGGTCAGCAACggaaaacactga

Function

GO: NA

KEGG:

id description
K07989 SH2D1B, EAT2; SH2 domain-containing protein 1B

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016551 True 486 mRNA 0.54 5 24802736 24809912

Neighbor

gene id symbol gene type direction distance location
AMCG00016550 NA coding downstream 2542 24790148 ~ 24800194 (-)
AMCG00016545 NA coding downstream 16326 24762569 ~ 24786410 (-)
AMCG00016546 LOC108276628,LOC107663623 coding downstream 63614 24721189 ~ 24739122 (-)
AMCG00016539 NA coding downstream 252611 24548377 ~ 24550125 (-)
AMCG00016534 NA coding downstream 409881 24375867 ~ 24392855 (-)
AMCG00016552 NA coding upstream 65952 24875864 ~ 24878227 (-)
AMCG00016555 mtmr6,LOC104951663 coding upstream 73991 24883903 ~ 24894419 (-)
AMCG00016556 NA coding upstream 120905 24930817 ~ 24953633 (-)
AMCG00016564 LOC107584968 coding upstream 163135 24973047 ~ 25001455 (-)
AMCG00016565 NA coding upstream 246648 25056560 ~ 25057570 (-)
G14245 NA non-coding downstream 22470 24716726 ~ 24780266 (-)
G14222 NA non-coding downstream 118201 24683065 ~ 24684535 (-)
G14218 NA non-coding downstream 184391 24615787 ~ 24618345 (-)
G14214 NA non-coding downstream 196415 24606108 ~ 24606321 (-)
G14213 NA non-coding downstream 200729 24601698 ~ 24602007 (-)
G14311 NA non-coding upstream 95209 24905121 ~ 24906546 (-)
G14400 NA non-coding upstream 312178 25122090 ~ 25122375 (-)
G14472 NA non-coding upstream 594983 25404895 ~ 25405101 (-)
G14487 rpl19,LOC101068736,LOC103368168 non-coding upstream 707077 25516989 ~ 25520096 (-)
G14496 NA non-coding upstream 733134 25543046 ~ 25545725 (-)
AMCG00016538 smpx,LOC107721880,LOC107590224,LOC107663668,LOC107705278 other downstream 235780 24553692 ~ 24566956 (-)
AMCG00016531 NA other downstream 479278 24309256 ~ 24323458 (-)
AMCG00016505 NA other downstream 917478 23864581 ~ 23885258 (-)
AMCG00016504 NA other downstream 939997 23841062 ~ 23862739 (-)
G13969 NA other downstream 1102481 23699149 ~ 23700255 (-)
G14305 NA other upstream 71236 24881148 ~ 24882098 (-)
AMCG00016562 rnf6 other upstream 198062 25007974 ~ 25015343 (-)
G14392 NA other upstream 270656 25080568 ~ 25083699 (-)
AMCG00016579 NA other upstream 454860 25264772 ~ 25277478 (-)
AMCG00016591 NA other upstream 603404 25413316 ~ 25420371 (-)

Expression


Co-expression Network