AMCG00016577


Basic Information

Item Value
gene id AMCG00016577
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25326868 ~ 25347437 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016577
ATGTTCTGGCAGCTCTACCAACAGTCCAAGGAACTGTGTTGTTGGttaaatgTTCAGAGGGAGAGTAACAACGGGGTATATTTTGCTGGAATGTTCCGTATCGCCAACTTTGAGTTCATCCCAGAGTACAGACACACCGACTCCACCGAATTCCTCTCCATGGCCACCAAAATTGCGAATGTGgtGAATGATGTATATAGAAAGTCCCCAGTCTCCAAACTGTACCAGCAGTCTGTCATATCAGACATCAGTACCAACAATAAGGGGGGTCTCCTGGTCCATTTCTGGATGGTGTTCGTGGTGACCAGCATGAACAGCCATTCGCTGTGTGAGGAGTGTGTGGGTGCCATTCTCCGAGACTCGGTCCACACCAGCCTGCTGAACCGCAGCTCTGTGGGCTTCCTGCTCAGCCTGCCCGTGGACATCGACTCCATCGTGGTCAACGCGGCGTTGAGGTCAGAGTACACGGGGACAGATGCGAAGTGTGTGGACGATCTGTATGCAGGGCGTCCCGGCACCAGGCTGCCCCTGCATGTCTCTGTGCCCCAGGGGGGGCTGCTATGCCACGTGAAGCTCTCGACCACGCCTGGCTACCTTGCCCGCATCACCATTGCCTCGTTTGCGATCGAGCCCACAGCCTGCGTGAGCAGCTCACTCACCGTATACGACTCCCTCATCCCCCTCAGGACCAAGGTTTTGTATAAGGTTTGTGATCCTGTGAACTCGGCCTCAAATTTCTCCTTAGTGTCCACTGGCAATGTTATGTTCCTATCCTTCAGTCTAGGACAAGGAAGCAAGATGTTTATTGGATACTTTGAAGCCATCACTGAAAAAAGCTGCAGCAGCGCTCTCATTACTCTGGGCCAGTCAGCCTCAGAGGGAGTGATAACTAGCCCTCATCACCCGAGCTTCTTCCCCCCCCAATGTGACTGCACTTGGGAGTTTCAGACTCCCGATGGCTCGCTTGGAGTTGCGCTGACATTCCACAACTACATGTTAACAGAGAAGGGCTTGAGAGGCTGTGAACATGGCTGGTGGAGGATTAATGAAGTGATATACTGTGGAGACTATGTGGACCACCACACAGTGTTCCGCGTTGCCCATCCCAGGACTGAAATAGAGTTTCGCTGCAGCTCCAAGTTCTCAGATCCTCCTCTCTCGGCTGAATACCGCAGCTACAACATCAGCGAGCCCTGTGCAGATGGCCACTTCTTGTGCTCCACGGGGCTGTGCGTGTCAGCAGAGCGGCGCTGCGACGGCGTGGATGACTGCCTGGATGAGAGCGACGAGGTCTATTGCTCTAAACCTCCCTGCGATGGATTTGCCCAGCAGCACCCAGACTACGCCTGCAATGGAGTGAGGGACTGTGAGGATGGCAGTGATGAGGCCAACTGCACACAGGAAGTTCCGTGCACACCGATCAGCTACAGATGCCGAAATGGTAAGTGCATCCGGAAGAGGAACGCGGAGTGTGACGGCGTCCCGGACTGTGCGGACAAGAGTGACGAGAGTCACTGTGCTTGTGGCCGCCCAGCCCCAGTGAGGGCTCGTGTGGTGGGCGGCTCGGAAGCCCAGGAGGGCGAGTGGCCGTGGCAGGTCAGTATGCACTTTGCCGGCACCTTCTACTGCGGTGCCTCTGTGATCGCGGCCGACTGGCTCCTGTCCGCAGCACACTGCTTCAGCAGGGACAGGCTGTCTGACCCCCAACAATGGAAGGCCCACCTGGGGATGCGCTCTCAGGGCACCGCAAAGTTTGTAGTGGGGATCAGGAGGATAGTGGTGCACGAGTTCTACAGCGCCCGCAACTTTGACTACGACATCGCACTGCTGCAGCTCAGCAGCCCCTGGCCCCTGGCTCTCAGCTCCCACATCCAGCCCATCTGCCTGCCGCCCTCCTCCCAGGCCGTGCCTGCTGGACACAACTGCTGGGTCACCGGCTGGGGCAGCAAGGCTGAAGAAGATAAAGATCTGCCCCAGATCCTCCAGAAGGCAGAGGTCCAGGTTATCAGCCAGACTGTGTGCAAGGGGAGGTACAGCCCGGTGTCACCGCGCATGCTGTGTGCTGGGGTGATGACTGGAGAGAGGGATGCCTGCCGCGGGGACTCGGGGGGCCCTCTGTCCTGCCGGGAGCCCAGTGGGGGGCACTGGTTCCTCACCGGCATCGTCAGCTGGGGGGCCGGCTGTGGGAGGCCCAACCTCCCTGGTGTCTACACAAGGGTGTCCAATCGAGCCAAAGGAATGAGTGCCATGACAGCGTTTCCTAAAGACAGGGCTTGCGAGGTTTACAGCGTATCGGGTTGTCGGTGCTGCTCCGCTGCCAGCGTACCTGTGCAGAGACGCTGTCGGCAGTCCCCTGCCTGCGGCTATCTCTGTCCGGCCAGTGAGCGCCTCTGGAAAAGATGGCTGCTGCTCGGAGCGCTCCCTGCAGCCCTGCTGAGCACTGCCGTGCTGGTGGTGACCCTGTGCTACTGCCTGTCCCCAGCCATGTCTGTCTTCTACATCGGTGGAAGTGTGGAAATTGCTAACCTGACCTACACCAGTGAGCTGGCGGACTCACAGTCAGCACAGTTTCAGACCCAGGCTGAGGCAGTTAAACATTATTTAACAGAGATCTACGATTCTTCTGTCTGGGCTAAATATTATGTGAAGTCAGGTGTTACTGCCTTCAGTGAAGGAGAAGGCGGTCTGCGGGTCTTCTACTGGAGTAAGTTCTGCTCTCCCTCTGATGTGGCTTCAAACATCAGGAGCGCCCGGCCCTCCCGACTGCAGAGGACTGGCGCCCTCAAGTCCAAACCTTATTTCATCCGGAACGAGGAGGTGTACTCCTTCCAGAACAACTGGGACAATCTGCAGTTATTTGATTTAGACTCTGAGGAATATGACCTAGAtgacaagaataaaataaaaaaccaaGGATCGTCACAAAGTATCAAATGGCAACTAGGATTCCAAGCCATGTCATTCGACCTATATGCAAAGTATGGCAATAACCGGACCCTGACCCTGACCAGTCCCAAGAAGCCCTACTATCAGTGGAGGCTTCGGGTCCCCTCGGGCCACGTTGTCCGGCTGGTCATCACCCCTCTGCAGGGAGCCACGCCAGGGAACTGCGCCGCCCACAAACTGTCTGCATATGACTTCCTATTGCCTCTGCAGAACAAGATCATTGCCAGGTGGTGTGGAGTGCCAGTCACAGGAGTGCCCCCTGTGATCAAGCTGACCTCCTCCGGCAACGTCATGCTGGTCACCTTCTCCTTCAACAGGCAGAGGGATGGTGCCATCTTTAAAGCCTACTTCCAAGCCATGCCCAAAACAGGCTGTGGCGGTGCCCTCTCTGCTTGGAATGGAACAGTGACCTCACCCTACTACCCAAGCCACTACCCCCCCAACGTGGACTGCACCTGGACTATAAGCACTCCTGCTCCAGGACACTTGTTCTCACTGACCATTGCGGTTTTAGACATCCAGGACTCCCCATCCTCCAGCAGCTGTGAAAGAGACTGGCTAGACATCAATGGAATCAATCCCATAGCAGACAGCAGCAGGAAGAGGGTGTATTCCTCGCCCGTCACTCTGCATTTCCACTCGGACGAGTCCATCACCCGCAAAGGCTTCTACATCCTCTACCGGGCACTCCCCCTCGACAAGTCGTGTCCCAAGCAGTTCCAGTGTGGGGATGGCTCCTGTGTGCCCCCGAGGAAGCTGTGTGACGGGATGAAGGACTGCTCCGATGGCAGTGACGAGGCCAGATGTGCAGTGTGTGCCTCGGGacaagtgcattgtgggaatggCCAGTGCAGACCCCACATCGGACTGTGCACCGGACAGAACAACTGTGGAGACAATAGTGAGGAGGGGGACTGCGCAGGAGACTGCTACCTGCGCTGTCCCAAGGGGCTTTGCATCCCTCAATCCTCCGTCTGTGATGGcatcattgactgcaaagatCGCAGCGATGAAATCAATTGCACGAGAGCATTTCATAAAGCCTGTTCTCCATCTTCCTAcaaatgtctgaatgggaagtGTCTGAACAAACTGAACCCTGAGTGTGACGGAGTGAAGGACTGCACGGACGGCTCGGACGAGGTTGGCTGTGGGTGTGGCTCCAAACCGCGGAAGAAGAGCAAGATTGTTGGCGGTGGGAATGCGCAGTCGGGCGAGTGGCCCTGGCAGGTCAGCCTGCAGATGGGGCGCTACGGACACGCCTACATGGGAATGAGCATCATGAACACCCTGGGCGTCTCGGTGGTGACCAGGCTGGTGCGGCGCATCGTGGTCCATGCGCAGTACGATCAGTACACCTCGGACTACGACATCGCTCTGCTGGAGCTCAGCGCCCCTGTGTTCTTCAGCGAGTTCATCCAACCGGTGTGCCTGCCtgccaacactcactccttcgGCTCCGACACCAGCTGCTTCGTCACGGGCTGGGGGGTTCAAATGGAGGACGGTGAGCTGGCCTCGGTGCTTCAGCAAGCCACGGTGAAGATAATCAGCCGCAACACCTGCAACAAACTGTATGACGACGCAGTCACCCCCAGAATGCTCTGTGCTGGAAACCTTCATGGAGGAGTGGATGCCTGTCAGGGGGACTCGGGTGGGCCGCTGGTGTGCCtggagaaaggaaggaagtGGTTTCTGGCTGGGATCGTCAGCTGGGGGGAGGGCTGTGCGCGCCGCAACCGGCCGGGCGTCTACACACAAGTTATCACCTTCTCTGACTGGATTCGCCAACAGATTAACTGAGAGAGGGGCAGCACCACCATTGAAGGAAATCAAACCCATGTTTTAAGGattcagtttagttttgttttgttttttctggtcATCCCCCTTCCACCCCATGCTGACAGCCATTACAGTGTGACATTCTGCTGATCAGAAACAACTCCTACACAGACGTTCCTCACTGTGCCGCCAGCTCTCCCAGGGGAGGACACCACTGACCTGCTCCTCATTCAGACCCCAAGAGCTCTGGGTGAAGAATGGAAATAAGCCCCCTGGCTCTCCTTTAACAATGGGCTACTTTAACCCAGAGGGAGTGTTGGTAGGGGGTAACCCATGGATGAACCCATGAGGTTTGTATCAGCGACTTCATGTATGAGGATTAAGATTAATTGGATCTTGGACAGTGTGAAAGTTTTTTCTATCTGGAAAACGCCGCTGGCTGCTGAAGACCAGGGTTGCCTGTGAACTTTGCATTTCACCTCCCTCTCTGAAATGTTTCCTACCCAGTGTCTACCACCACATTGTTTTGTCTGTCTAGTAGGCACTCTGGAATTATATTACACTGTTAATTCATAGTTATGTAGCACTTTGCTTTATAGAAACAGTTTTGCCCTGTTCTATAATGTTATAATCTGGGCCTACAGGTAAAGGCTCTCTATCTACTCCAATGAGTAACACCTTGAAATATGATGCCATTGCATTCCTCGTGCTTCCCAAGGACCATTGTGGGCCTGTACTACAGTTCCTGCTTGGTCACATCGATATGGATCTCACTGGAAAGTAGAAAACCCAATTTACATGCCATATACTCTGGCCACAGAATGAGGATTATTTACTGCCTATAAATACTGAATTTATAGGATGAATCTTATATACTAGtaatacttatttttacataattatcaaaggttttattaattttctgaCTGTAGAGGTGCAGTATGTATTCTTTCTCATTCTCCACGTCTGAAAGTAGATTTTTCTTCAGGTTTTGAAATGGTGCTGCATTCTCTTATGGTTTATATTGATGTACCCTTTCTAACAGAAATTAATCTGACTATTAATTAGGCAGGAagtataatttgcatttaataactCTGGTAATGTTTATTAAAACCTCAAAGCGTGCAGCGGGGCTGGGAAATGCCGGCTCTACGCCCACAGCGCCAGCACGGCTATTTCACTGACCGACTGCAGGAGAGGTCCTGGCAGTTTCACCCCAGTCTCTCAAAGTCTTCATTCACAAAGACTGTGGACAGTCCAGCCTTGATGGCTTGGCTCAGTTATCACCTGGAAACATACctccacagaaaaataaatgcttttctgcaattca

Function

GO: NA

KEGG:

id description
K09638 TMPRSS7; transmembrane protease serine 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016577 True 6067 mRNA 0.54 36 25326868 25347437

Neighbor

gene id symbol gene type direction distance location
AMCG00016580 NA coding downstream 1398 25318898 ~ 25325470 (-)
AMCG00016578 NA coding downstream 15730 25285129 ~ 25311138 (-)
AMCG00016581 NA coding downstream 42441 25282234 ~ 25284427 (-)
AMCG00016583 NA coding downstream 44642 25279655 ~ 25282226 (-)
AMCG00016575 NA coding downstream 89357 25234992 ~ 25237511 (-)
AMCG00016582 NA coding upstream 8 25347445 ~ 25349142 (-)
AMCG00016593 tagln3b,tagln3,LOC107701685,LOC107705223 coding upstream 5904 25353341 ~ 25357447 (-)
AMCG00016589 NA coding upstream 10450 25357887 ~ 25360682 (-)
AMCG00016592 abhd10,LOC106590440 coding upstream 15961 25363398 ~ 25367579 (-)
AMCG00016590 NA coding upstream 73846 25421283 ~ 25423659 (-)
G14400 NA non-coding downstream 204493 25122090 ~ 25122375 (-)
G14311 NA non-coding downstream 420322 24905121 ~ 24906546 (-)
G14245 NA non-coding downstream 546602 24716726 ~ 24780266 (-)
G14222 NA non-coding downstream 642333 24683065 ~ 24684535 (-)
G14218 NA non-coding downstream 708523 24615787 ~ 24618345 (-)
G14472 NA non-coding upstream 57458 25404895 ~ 25405101 (-)
G14487 rpl19,LOC101068736,LOC103368168 non-coding upstream 169552 25516989 ~ 25520096 (-)
G14496 NA non-coding upstream 195609 25543046 ~ 25545725 (-)
G14507 NA non-coding upstream 257343 25604780 ~ 25609059 (-)
G14517 NA non-coding upstream 324867 25672304 ~ 25675200 (-)
AMCG00016579 NA other downstream 49390 25264772 ~ 25277478 (-)
G14392 NA other downstream 243169 25080568 ~ 25083699 (-)
AMCG00016562 rnf6 other downstream 311525 25007974 ~ 25015343 (-)
G14305 NA other downstream 444770 24881148 ~ 24882098 (-)
AMCG00016538 smpx,LOC107721880,LOC107590224,LOC107663668,LOC107705278 other downstream 759912 24553692 ~ 24566956 (-)
AMCG00016591 NA other upstream 65879 25413316 ~ 25420371 (-)
G14534 NA other upstream 405558 25752995 ~ 25754472 (-)
G14637 NA other upstream 734066 26081503 ~ 26083167 (-)
AMCG00016617 NA other upstream 800073 26147510 ~ 26149543 (-)
AMCG00016616 sp6,LOC102212756,LOC101463567,LOC100707362,LOC107396441,LOC106564946,LOC103384358 other upstream 809084 26156521 ~ 26159922 (-)

Expression


Co-expression Network