AMCG00016674


Basic Information

Item Value
gene id AMCG00016674
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 27286213 ~ 27286461 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016674
ATGCCGGGTCTCTACAGCAGCGGCGGCAGCATGCACCCCCCAAACCAGAGCGTGTACTCCGCCAGCTATGGCCTCAACGCGGGCTCCTTCAACATGCACTGCTCCCCCTTTGACCAGAACCTGCCCGTGATGTGCGCCGGGGACCCAGCCAAGCAGACCTGCAGCAGCAAAGCGGAGCAGCGGGACTGTGAGCAGCAGAATGAAGCCAACTTCCGCATCTACCCTTGGATGAGAAGTACAggtatgtga

Function

GO:

id name namespace
GO:0005540 hyaluronic acid binding molecular_function
GO:0031406 carboxylic acid binding molecular_function
GO:0043177 organic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016674 True 249 mRNA 0.61 1 27286213 27286461

Neighbor

gene id symbol gene type direction distance location
AMCG00016666 hoxb4,hoxb4ab coding downstream 38216 27247560 ~ 27247997 (-)
AMCG00016665 LOC105013251 coding downstream 66489 27217458 ~ 27219724 (-)
AMCG00016664 hoxb2 coding downstream 73291 27210523 ~ 27212922 (-)
AMCG00016667 NA coding downstream 91312 27187836 ~ 27194901 (-)
AMCG00016658 copz2,LOC107740614,LOC107662379,LOC107585036,LOC105013247,LOC106607483 coding downstream 311562 26967410 ~ 26974651 (-)
AMCG00016673 hoxb8,hoxb8ab,hoxb8aa coding upstream 413 27286874 ~ 27290861 (-)
AMCG00016672 hoxb9ab,hoxb9,hoxb9a,LOC106600835 coding upstream 13142 27299603 ~ 27313173 (-)
AMCG00016669 hoxb13aa,hoxb13ab,hoxb13 coding upstream 51546 27338007 ~ 27339593 (-)
AMCG00016670 LOC106579309 coding upstream 84518 27370979 ~ 27375700 (-)
AMCG00016675 ttll6,LOC107582749,LOC107727303,LOC107666932 coding upstream 89504 27375965 ~ 27381088 (-)
G15001 hoxb5a,LOC104941372,LOC103365501,LOC108278507,LOC108413114 non-coding downstream 20610 27263713 ~ 27265603 (-)
G14999 NA non-coding downstream 40966 27243966 ~ 27245247 (-)
G14943 nfe2l1,nfe2l1b,LOC107565927 non-coding downstream 302727 26979158 ~ 26983486 (-)
G14882 NA non-coding downstream 543875 26741085 ~ 26742338 (-)
G14832 NA non-coding downstream 763166 26522804 ~ 26523047 (-)
G15016 hoxb9 non-coding upstream 9624 27296085 ~ 27308958 (-)
G15066 NA non-coding upstream 108658 27395119 ~ 27398583 (-)
G15071 NA non-coding upstream 126539 27413000 ~ 27413229 (-)
G15073 NA non-coding upstream 129192 27415653 ~ 27415892 (-)
G15074 NA non-coding upstream 129788 27416249 ~ 27416539 (-)
AMCG00016671 hoxb6ab,hoxb6,hoxb6a,LOC105013254,LOC103045875,LOC107582892 other downstream 6879 27265887 ~ 27279334 (-)
AMCG00016662 cbx1,cbx1b,LOC108279860 other downstream 282506 26995173 ~ 27003707 (-)
AMCG00016644 NA other downstream 642720 26626707 ~ 26643493 (-)
AMCG00016643 NA other downstream 693913 26582526 ~ 26592300 (-)
G14843 NA other downstream 714572 26568669 ~ 26571641 (-)
G15026 NA other upstream 83129 27369590 ~ 27370139 (-)
G15067 NA other upstream 115215 27401676 ~ 27403922 (-)
G15076 NA other upstream 138432 27424893 ~ 27428651 (-)
AMCG00016712 NA other upstream 843551 28130012 ~ 28157200 (-)
AMCG00016732 NA other upstream 1495011 28781472 ~ 28785507 (-)

Expression


Co-expression Network