AMCG00016777


Basic Information

Item Value
gene id AMCG00016777
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 30266983 ~ 30278893 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016777
ATGTGCACTGATAATGCAATGGAGATGGAGGGGCCACAGAGAGGAGTCTGTGAGGAGGCGGACAGACCCGGGGATGAGGGGACAGACGGACAGGAAAACTCCCCCAGCGATACTCCAAGCACCATGCCGGCAGACCCTCCGGTGGTGAGGCGCTCCAAACCCCTcagcatcaacaacaacagATTCAAAGGGGAGGAGTCTCAGACGACATCAGTGCCTTCAATACCCAATCCATTCCCTGAACTCTGCAGCCCCTCTCATTCCCCCATCCTGATTGGCTCTCCAATGGGGAACGGCACATCCCCTGCAAGTGGCACACATgtgGTGAAGGTGTTCGGAGAGGATGGGAGGAGCCGCTCCCTTTGGGTACCAGCAGGGGCCACGGCTCGCGATGTCTGCCACCTGCTGGTCCAGAGAGCCCACTGTGCTGACCAGGAGAATTGGGCCCTGATAGAACTGCACCCATCCCTGGGGCTGGaGCGCTGTCTGGAGGACCATGAGACGGTGGTGGAGGTGCAGGCCACATGGCCACTAGAGGGCGACAGCAAGCTCCTCTTCCGCAAAAACTTCGCCAAGTATGAGTTCTTCAAGAAGCCCATGCTGTTTTTCCCAGAGGACATGATCTCGGACTGTGCTGACGTCAATAAGGGCATGACCTCATCCGAGCTTATTCAGAACCTGCTGAACTCGGGCAGCTGCCCAGAGATCCAGGGCCATCTGCAGATAAAGGAGCCGGGACGAAAGGCCTGGAAAAGAGTCTGCTTCTTCCTGAGGAAATCCGGCTTCTACTGCTCCACCAAGGGCTCTTCCAAGGAGCCCCGTCACCTTCAGTATGTAGCTGATCTTGAAGAGCTCAACATCTACAGTGTCATAGGAGGTCGCAAGCTCTACAGCGCCTCCACTGACTACACCTTCTGCATCAAGCCCTGCAGGAACCGCACACGCTCACAGGACATGAAGCTGCTGTGTGCCAACAGTGAGCAGACACGTACCTGCTGGACTACTGCCTTCAGGCTATTTAAGtacGGCCAGCAACTGCAGTATAACTTCCAGCAGTCTGTGTCGACTCGGAGCCAGGAGAGCACCCTGCACCACAGTGCCAAGCGCTGTGTTTCAGAAGCTTCCCTGGTTGCCATGGATTTCTCTGGGAAGGCGGGGGGGCGTGTCATCGAGAACGCCAGAGAGGCACAGAGTGCAGAGCGGGAAGAGGGACAGGCCTGGCGGGTGAGGGGACAGGGGAGGCTGGTGGAGGGACAAGAGGAGCAAGCAGGACCGGGGGCGCGGGAGATGGGACAGGGAAGGtctGTGATTCACCGGGCCCAGCCCTGGTTCCATGGCGGCTTGTCTCGGAGGGAGGCCCAGGGGCTGATCGAGGAGCAGGGACTGGTGGATGGgatgTTTCTAATCCGGGAGAGCCAGCAACATGCCAAGTGTTTTGTCTTGTCTCTGTGCTACAAGCTGAAGACCAAACACTACCTCATCATCCCTtgtgAAGAGGATGGGAGGAAGTACTACACCATGGATGATGGGGTGACGCTCTTCATTGATCTGCTGCAGCTCGTGGAGTTTCATCAGATCAACCGAGGCATCCTGCCCGTGTGCCTCAAACACCACTGTGTCCGCGTTGCACTCTGACTCCCCCTGCTGCCAGGGGGCGCTGCAGTTCAGGTACTAGGCATGGCAGTGCAGCGAGAGGGAGGTGGGTGGCGGTGCAGCCAGGCAGGAGAATATGGtggcacaaacacaaaaccagaTATCCACACAAGCTATGTTGCCGTCTCTGCTTCAGTGCGGTTGCCCTGCCCTGTCGAACATGGAAGCTGGACAACTGACATATCAAAGTCACAGAAGCCCATGGAAGGGATCTGTTGACCTCAAAATAAGAGCAGCTGCAGACTTTTGCAACAAAAGGTTGAGGTGAAacggagggagaaaaaaaacaaatctatctTCATTATATTGCTTCTTAATATGCAAATTTAGCCAACAAGTAGCACAACAATTGAGTCATCTAGCCTCAGACACTGGCTGACATGGAAGAGATGGCAGCATGAGAAACTTCAGATGAGTCTTAATGGGCACAAGTGGCCATAATAGTTCcatccctgtgtgtctgtggacaGTGTTGCACATGAGATGCAGGGACTACTCCATGGGTTCACAGACTCTGTGTTCCTGCCCTTTCTGGATCACATTGAGTATCAGAGGCTTTTATTTCCCTGGCCTCTTTTTCTTGGTGGGGGGGGAGATGGACTAAGCAtctattgtgtaaactgtaccTGAGCTCCTGCTGTCTCTTGCATGTCTTACCTGCTCTATGCACTGTTGGTGGAGTGTCCGATTTACCTGTGTCACATTTTGAGTATTCAGTCACCGCCAAGATGGATCTTCTTGCATGGGTATGGCATATTTGTTGACCGACTCGCCAGCCATCATTTGGAGCCTCATTGGCACTAAGGTGTTAACAAGAGAACGACAGGCAGGCTTTGCCATGGCCTTTCGGAATGGTCTCGAGGTTGGGATTGCTCTGGGCACTGCCTGAGCAATGAATTGATGAATGACATTTTACTGGCTGCAGAAAAACAGCTGTTCGGACATCACCTTGATCGCTGCAGCTGAAACAGTTTAGGCAGCTAAGGACTTTATTTTCCAATGTGGGAAAAAGTGGGACCTGACTGTGAATTGGGACTCACTACTGTAACCAGATGACAGGGGTCTGAGGGTTGTGGTAATGGTGGCTGTGACagaattattatatatgtgtatataatatatatgggTTTTTCCTCCATGTTTCTAACTGTCATGTTTGCCACAATCCGGAAACCACCTTGGCCTCAATTAAAATTTAACAAGGACAAATTTAACTCCATATTTGTgggtatgaaaatgtaattaagggCGATTTAGCTGTCTAGCAGCAAGCAGACAGCAGAATCTCCAAAACTAAGGCATTATATATCAGATTGTATTTCACTATCCTATTAAATTTATCTGCGGGCTGCTGATGGCTTAGCTGTTGCTTTCTAGTATATCCAGTTACCTGTGTTTGCACTGGATTTCTGTTCACTTGATTGTCATCTTTCCTTTATGCATCCCATTTTGGCCATGCTGTGTTCTGAGAATAGTGCCTATTAGAGAGTGGAAGGGTTGCATAGTAACCCAGGGCCTGGCAAATAGATGTTTACTTTGAATATTAATCCACATTGTCTTTTCACAAGCAGCTCTTAAGCAGGACATGTAAACAAAATGAAGTGTAAGTAATatggtttcttttttgtggGGAAGGGATGGGTGGCAGTCATGTTCTTTGTCTGTAAAAGCCTGgtcccccaccaccaccccttcAGCTCCTGTTAATGGGACAGTCTGTCAGCATATCCAGTCTCTCTAAGCAGGAACAACAGCATGGCACATCTGCCAGAGCAAACGCGCATATGGCTGTGAGAAGAATAGCAAATTAGAGCTGGGAGCTCCCCTGCGGCATGCATGGTAACTGCCTCTGCCCACAGCGTGGCTTGCCATGCAGATTAGTATGTTGTCTGTGCTCTTTACCAgctatgatttaaaatgtaataattgtgcCACTCAATTGGCACAAATCCACCTAGACCAAGGATGGGGAATGCCAGTGGTTGAGGGTCAGAGTCCTACAGAGTTTCACAAGTTCACCTTTTAGTGAGCAACCAAGTGACCTGGGATGGCCAGGTGATTTGACCAGTTTCAAATGaatagttcaattaagtcattaatatCTGGTGGTGGAATAAAATCCAGGACACTGTGGCTTCCTTAAGGCCTAGAGTTGTCCATCCCTAACCTAGAGGTTTGGCTTGTATGGAAACATATGGTTGGTGACAGTGATTTCTTTAGGGTCTGTCAAACATCCACTGAAGGAagtctttccattttataagCTGCTAGTAACCAGCTGAGCGAAAAAGAGACTGGatgtctttctctttcatttgttttacctttACAATGGTGCCTTGTGGTGCATATCCTTTTGATATGCAGATTTATGCTTTActtgtactgtttttgttttatttcacttcacTGTCCTTCacaatgttttactgtgatatTTTTTTCTAGGGTGAATCACTAAACTGACACAAAAATCTTATAAGGGATGTCCCAGCACAGAAACCTCAAACCCAAATATCATCATTGGTTGTTTTGggtatttgtttgtaatttctgTACATACAGTGTGTACATCTCGGCTGTTTGAACAACCACCATGTTTTGTAACGGAATTTGATTTGTTCTCATTGTGATATTACGCCAGCAATGTAGCATGACTGTTTATGGTATATGGTAGGGCCAGACTGGCCAACTTGGTTTCCATTGACAGGATGTCTGAAAGGTGAGCTGGTGGTGGCAGCGGTTTTCCAATCAGGAAGTAAAAATGAGCCCAGTGTCTCCTGTGAAAAACAGAATTCAGAAGGCAGTTATCCTGCAGAACAGACAAATATAAGGCCACACTTTCCTCTGGCTTGACCAAGTGTGGTAATTAGGGTTAACATCATCTTATCATGTGATcactttttgtatatatttttggatatttatttattctcctaTGATTAGtcaaagtaaattattattgataatatcATTAAGGGGGAGTGGAGGGATTAGGTTGTCCTGAGGTGTTCTGTGCCTGCATATTGGGCTTTTCCACTAtggttgttttaaaaattgatCTTGCATCGTATGCCCTCCATCTAAAGATGTCTATGCATTAGCACAgtatacacacagcacacactgatgGAGAGGactgttttcagttcagtttagcAGATTTGCCACCAGATGGCAATCCTCCCCCCTGTATGTCTTCTGGAACAGGTGCCACATCGTAACTCGCTTACATGAAGTTCTAAAGGCAAGTAAACTATTGAAAATTGAAGTGAGCTCTTCACTTTAGCGGATCCTTGAAAGGAATGCTAACTGCGTGTGgtggggagaaaataaaacaagaactgAACAAAATGATTTTGTCAGGAATGAGTCGTGATGAGTTGAGGTGTTAAAAGAGTTGGTTGTCAGTGGTTGGGAATAATGTGTCTCACTGATAGCCTTGATGTTGTTGCATGTGATGTTACCATGCTGTAATTAAGTAACATCGGATGAGATGGACGAATACATTGATAAAGGAGCAGGATCTGTTTAAAAAACTATCAGACTATTTCTGCTGGTGTTATTCCACCTCCTGCCAATTCTGTTGAATTcctttttgtattgaattatatGTATAAACCCCAGGCCAGTTTACTTTAATcctattttatatacatgtataaataaaaaaattaaaacctatttaaatgcattatattatgtataaaaataacacatgcaATTGTAAAACAAGTTTTGAAACTGTTTT

Function

GO: NA

KEGG:

id description
K23695 GRB7; growth factor receptor-bound protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016777 True 5404 mRNA 0.47 15 30266983 30278893

Neighbor

gene id symbol gene type direction distance location
AMCG00016781 NA coding upstream 4002 30261686 ~ 30262981 (+)
AMCG00016778 arf1l,LOC101077609,LOC103369524,LOC100699666,LOC104938681 coding upstream 11270 30254536 ~ 30255713 (+)
AMCG00016776 NA coding upstream 53868 30178824 ~ 30213115 (+)
AMCG00016771 NA coding upstream 143912 30118014 ~ 30123071 (+)
AMCG00016764 NA coding upstream 207701 30054798 ~ 30059282 (+)
AMCG00016782 LOC107688136 coding downstream 80574 30359467 ~ 30360383 (+)
AMCG00016785 NA coding downstream 98853 30377746 ~ 30410379 (+)
AMCG00016784 NA coding downstream 155960 30434853 ~ 30439443 (+)
AMCG00016783 NA coding downstream 169387 30448280 ~ 30453102 (+)
AMCG00016788 NA coding downstream 177081 30455974 ~ 30461368 (+)
G15651 NA non-coding upstream 51273 30213172 ~ 30215710 (+)
G15605 NA non-coding upstream 247296 29930664 ~ 30019687 (+)
G15591 NA non-coding upstream 373489 29890916 ~ 29893494 (+)
G15505 rara,LOC106578316,LOC108434941,LOC107571738 non-coding upstream 840366 29425900 ~ 29426617 (+)
G15475 NA non-coding upstream 953275 29233750 ~ 29313708 (+)
G15730 NA non-coding downstream 150160 30429053 ~ 30431794 (+)
G15817 NA non-coding downstream 626717 30905610 ~ 30906839 (+)
G15847 psmc5,LOC107745657,LOC107684752 non-coding downstream 727004 31005897 ~ 31007006 (+)
G15853 NA non-coding downstream 754176 31033069 ~ 31033321 (+)
G15961 NA non-coding downstream 1196414 31475307 ~ 31476218 (+)
G15659 NA other upstream 30142 30236454 ~ 30236841 (+)
AMCG00016770 rpl27,LOC106601555,LOC107551168 other upstream 153699 30109599 ~ 30113284 (+)
AMCG00016769 NA other upstream 159256 30022607 ~ 30107727 (+)
AMCG00016772 g6pc other upstream 183455 30072938 ~ 30083528 (+)
AMCG00016739 wnt3,LOC103381861,LOC108249203,LOC104961604,LOC104925160,LOC105936264,LOC101174231,LOC100707095,LOC108273758,LOC106589299,LOC101469754 other upstream 1010159 29234504 ~ 29256824 (+)
G15855 LOC105013322 other downstream 780447 31059340 ~ 31061145 (+)
AMCG00016820 NA other downstream 1194813 31473706 ~ 31493104 (+)
AMCG00016829 NA other downstream 1422776 31701669 ~ 31731446 (+)
AMCG00016830 NA other downstream 1449663 31728556 ~ 31751113 (+)
AMCG00016841 NA other downstream 1972915 32251808 ~ 32260627 (+)

Expression


Co-expression Network