AMCG00016850


Basic Information

Item Value
gene id AMCG00016850
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 32382683 ~ 32383195 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016850
ATGTTCGCCAAGACTGAGAACAAGGCCATCAAGCTGTGGACCAGGGTCGCCCAGATCACGATTGGGTTCTGCCTGCCTTTCATGGTCATGCTCTTTTGCTACTCGGTCATCATGCGGACCCTGCTGAGGGGGCGCAGTTTCGAGAAGCACAAGGCCCTGAGGGTAATTGTGACCCTGGTGCTGGTTTTCCTCCTCTTCCAGCTTCCGTACAGCGTGGTGCTCCTCCTGAAGACGGCCGGAGTTCATGAGGCTTCCTGCAGCGACTGGGATTCCACCCTGAAGTCAGAATACGTTACGGGCAGCTTGGCCTACAGCCGCTGCTGCCTCAATCCCCTGCTCTACACCTTCGTGGGCGTCCGCTTCCGAAATGACGTGCTCATGCTCCTCAGAGACCTTGGCTGCATCAGTCGGGCCCAGTACTCCTGCCATGTGGCCCCCCGCCAGGACAGCTCCAGGCGCCTCTCTTACGCCTCCAGTTCTGCTGCTTACACGGAAACCTCTTCCATGTTCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016850 True 513 mRNA 0.58 1 32382683 32383195

Neighbor

gene id symbol gene type direction distance location
AMCG00016849 NA coding downstream 57522 32304650 ~ 32325161 (-)
AMCG00016846 NA coding downstream 98643 32269963 ~ 32284040 (-)
AMCG00016837 LOC106607518,LOC104946854,LOC106600796,LOC102209712,LOC101480582 coding downstream 380148 31979211 ~ 32002535 (-)
AMCG00016838 NA coding downstream 530564 31844462 ~ 31852119 (-)
AMCG00016834 NA coding downstream 538631 31839831 ~ 31844052 (-)
AMCG00016856 NA coding upstream 55041 32438236 ~ 32469626 (-)
AMCG00016860 NA coding upstream 86700 32469895 ~ 32470107 (-)
AMCG00016858 wnk4b,LOC107754305,LOC107582920,LOC107585056,LOC107740640,LOC107683678,LOC108429078 coding upstream 125154 32508349 ~ 32533759 (-)
AMCG00016857 wnk4,LOC108257086,LOC108429078,LOC105912834 coding upstream 162424 32545619 ~ 32546814 (-)
AMCG00016862 NA coding upstream 200824 32584019 ~ 32590534 (-)
G16153 NA non-coding downstream 174566 32206962 ~ 32208117 (-)
G16154 NA non-coding downstream 175806 32205723 ~ 32206877 (-)
G16069 NA non-coding downstream 611409 31769730 ~ 31771274 (-)
G16043 NA non-coding downstream 662647 31718900 ~ 31720036 (-)
G16026 NA non-coding downstream 683283 31699136 ~ 31699400 (-)
G16244 NA non-coding upstream 9947 32393142 ~ 32393380 (-)
G16245 NA non-coding upstream 32996 32416191 ~ 32416444 (-)
G16248 NA non-coding upstream 42521 32425716 ~ 32425956 (-)
G16249 NA non-coding upstream 44657 32427852 ~ 32428080 (-)
G16250 NA non-coding upstream 51041 32434236 ~ 32436683 (-)
AMCG00016847 NA other downstream 114715 32261549 ~ 32267968 (-)
AMCG00016815 NA other downstream 994415 31380547 ~ 31388268 (-)
G15787 NA other downstream 1853183 30526292 ~ 30529500 (-)
G15706 NA other downstream 2180332 30201459 ~ 30202351 (-)
AMCG00016740 ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 other downstream 3157096 29201872 ~ 29225587 (-)
G16247 NA other upstream 39863 32423058 ~ 32423438 (-)
AMCG00016859 NA other upstream 114312 32497507 ~ 32507319 (-)
G16356 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 other upstream 792881 33176076 ~ 33178883 (-)
AMCG00016889 LOC107570748,LOC106906011 other upstream 1008594 33391789 ~ 33434651 (-)
AMCG00016891 limd2,LOC107674139,LOC107658411 other upstream 1105530 33488725 ~ 33513579 (-)

Expression


Co-expression Network