AMCG00016860


Basic Information

Item Value
gene id AMCG00016860
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 32469895 ~ 32470107 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016860
ATGCGCTGCCGAGGTGCAGGCAGCCAGAGAGGACCTGCGACTCCCTCCTCCGCGTCCGACCCCAGCCGCTCCCCCAGCCGCGCTGTTCTCCGGTGTGGAGAGTCATGTGACCCGGCCCAACTGCGCACTTCGGCGGAGACAAACAACAGCAGCGCTCGCTGTCCCCTCCGGACCTGCCGCAGCGCCGGCGTTCAGCACTGTGCCCGCCTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016860 True 213 mRNA 0.69 1 32469895 32470107

Neighbor

gene id symbol gene type direction distance location
AMCG00016856 NA coding downstream 269 32438236 ~ 32469626 (-)
AMCG00016850 NA coding downstream 86700 32382683 ~ 32383195 (-)
AMCG00016849 NA coding downstream 144734 32304650 ~ 32325161 (-)
AMCG00016846 NA coding downstream 185855 32269963 ~ 32284040 (-)
AMCG00016837 LOC106607518,LOC104946854,LOC106600796,LOC102209712,LOC101480582 coding downstream 467360 31979211 ~ 32002535 (-)
AMCG00016858 wnk4b,LOC107754305,LOC107582920,LOC107585056,LOC107740640,LOC107683678,LOC108429078 coding upstream 38242 32508349 ~ 32533759 (-)
AMCG00016857 wnk4,LOC108257086,LOC108429078,LOC105912834 coding upstream 75512 32545619 ~ 32546814 (-)
AMCG00016862 NA coding upstream 113912 32584019 ~ 32590534 (-)
AMCG00016864 NA coding upstream 204210 32674317 ~ 32692351 (-)
AMCG00016867 NA coding upstream 393139 32863246 ~ 32871525 (-)
G16250 NA non-coding downstream 33212 32434236 ~ 32436683 (-)
G16249 NA non-coding downstream 41815 32427852 ~ 32428080 (-)
G16248 NA non-coding downstream 43939 32425716 ~ 32425956 (-)
G16245 NA non-coding downstream 53451 32416191 ~ 32416444 (-)
G16244 NA non-coding downstream 76515 32393142 ~ 32393380 (-)
G16292 NA non-coding upstream 384674 32854781 ~ 32857465 (-)
G16293 NA non-coding upstream 389134 32859241 ~ 32861597 (-)
G16325 NA non-coding upstream 514147 32984254 ~ 32984464 (-)
G16375 NA non-coding upstream 785546 33255653 ~ 33256382 (-)
G16377 NA non-coding upstream 813907 33284014 ~ 33284227 (-)
G16247 NA other downstream 46457 32423058 ~ 32423438 (-)
AMCG00016847 NA other downstream 201927 32261549 ~ 32267968 (-)
AMCG00016815 NA other downstream 1081627 31380547 ~ 31388268 (-)
G15787 NA other downstream 1940395 30526292 ~ 30529500 (-)
G15706 NA other downstream 2267544 30201459 ~ 30202351 (-)
AMCG00016859 NA other upstream 27400 32497507 ~ 32507319 (-)
G16356 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 other upstream 705969 33176076 ~ 33178883 (-)
AMCG00016889 LOC107570748,LOC106906011 other upstream 921682 33391789 ~ 33434651 (-)
AMCG00016891 limd2,LOC107674139,LOC107658411 other upstream 1018618 33488725 ~ 33513579 (-)
G16563 NA other upstream 1636583 34106690 ~ 34107941 (-)

Expression


Co-expression Network