AMCG00016910


Basic Information

Item Value
gene id AMCG00016910
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 34169488 ~ 34191749 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016910
ATGCCAGACTCGACGATGCTGAACAACAGGAACGGGATGGTGTCTAACATTCAAACCAGAATACGGATAGACCCCTTCAAGTCTAATTACGATTTGGTGGGCAAAGAATTGGGCAGGGGGAAGTTTGCCGTGGTGAAGAAGTGTGTGGAGAAGGCAACGGGGAACGAGCATGCCGCCAAGTTCCTGAGGAAGCGGCGGAAGGGGGAGGACTGCCGCATGGACATCATCAACGAGATCGCCATCCTGGAGTCGGCCAAGGCCAACCCCTTTGTGGTGTCGCTGCATGAAGTCTACGAAACCACCTCCGAGATCATCCTGGTGCTGGAATATGCTGCTGGGGGGGAGATCTTTAACCAGTGCGTGGCTGACAATGACGAGGCCTTCACAGAGAAGGACGTCATCCGGCTGGTGCGACAGATCCTCAGCGGAGTGGCCTACCTGCATCGTAACAATGTGGTGCACCTGGACCTCAAGCCTCAGAACCTCCTGCTGACCAGCTGTCAACCACTGGGAGATATCCGCATAGTGGACTTCGGTCTCTCCAGACGGATGGACAATGTGAAAGAGGTGCGCGAGATTCTTGGTACTCCAGAGTATGTAGCTCCCGAAATCTTGAACTACGAGCCCATAAGTACAGCGACAGACATGTGGAGTATCGGGGTCCTGACATACGTTATGCTGACTGGAGAGTCCCCCTTTCTGGGTGAGGACAAGCAGGAGACCTTCCTGAACATCTCCAAGGTCAACGTGGACTATTCTCAAGACGTGTTCGAAGGCGTGTCCAGTCTGGCCATGGACTTCATCAAATCCCTGCTCATTAAAAACCCCAGCCTCCCCCATGCCAACCTGCTGCCAGCCTTGGTGGAGGCAGAGACCAGCCAGTCGGAGTCCGAGCCCGAGAGCCCAGACTCGGAGTCCCAGGAGCTGGTCATCATGGCCTCTTACACCCTCTGCTCCAGCCAGAGCGACATGAAGGTCGTGAGGAACACCTTCGCCTTTGATGAGCCTTTTGTGGCCCGAGCTGACATCCAGCAAGAACTAGTGTGCTGA

Function

GO: NA

KEGG:

id description
K08804 STK17; serine/threonine kinase 17

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016910 True 1050 mRNA 0.55 7 34169488 34191749

Neighbor

gene id symbol gene type direction distance location
AMCG00016905 spop coding upstream 367678 33791287 ~ 33801810 (+)
AMCG00016906 spop,LOC107754841 coding upstream 395955 33761418 ~ 33773533 (+)
AMCG00016897 s35b1,slc35b1,LOC106601597,LOC107590797 coding upstream 507181 33652917 ~ 33662307 (+)
AMCG00016902 NA coding upstream 541199 33625976 ~ 33628289 (+)
AMCG00016896 NA coding upstream 544953 33619292 ~ 33624535 (+)
AMCG00016913 ptrf,LOC103029568,LOC105905374,LOC105028466,LOC107742253,LOC107664665,LOC103381660 coding downstream 77249 34268998 ~ 34271418 (+)
AMCG00016914 ptrfb,LOC105935706,LOC102209316,LOC102787483,LOC101465061,LOC103482185,LOC103142478 coding downstream 102464 34294213 ~ 34296833 (+)
AMCG00016912 stat3,LOC107653351 coding downstream 119119 34310868 ~ 34340346 (+)
AMCG00016916 NA coding downstream 168478 34360227 ~ 34435938 (+)
AMCG00016915 LOC105013349,LOC103368144,LOC102309899 coding downstream 252652 34444401 ~ 34472634 (+)
G16552 NA non-coding upstream 63801 34104456 ~ 34105687 (+)
G16542 NA non-coding upstream 174106 33993182 ~ 33995382 (+)
G16512 NA non-coding upstream 518199 33651081 ~ 33651289 (+)
G16395 NA non-coding upstream 841146 33325094 ~ 33328342 (+)
G16351 NA non-coding upstream 989049 33180239 ~ 33180439 (+)
G16646 NA non-coding downstream 406073 34597822 ~ 34599917 (+)
G16668 NA non-coding downstream 544588 34736337 ~ 34736549 (+)
G16692 NA non-coding downstream 584076 34775825 ~ 34777047 (+)
G16698 NA non-coding downstream 629448 34821197 ~ 34821413 (+)
G16705 nkiras2,kbrs2,LOC106607286 non-coding downstream 899710 35091459 ~ 35094092 (+)
G16550 NA other upstream 68625 34100315 ~ 34100863 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other upstream 69892 34093276 ~ 34099596 (+)
G16546 NA other upstream 121768 34047371 ~ 34047720 (+)
AMCG00016901 NA other upstream 495127 33668593 ~ 33674361 (+)
AMCG00016898 NA other upstream 519408 33630012 ~ 33650080 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other downstream 966848 35158597 ~ 35204232 (+)
G17193 NA other downstream 4304302 38496051 ~ 38503632 (+)
AMCG00016979 NA other downstream 5047324 39239073 ~ 39254490 (+)
G17697 NA other downstream 8199548 42391297 ~ 42397787 (+)
AMCG00017078 LOC106565757 other downstream 9934465 44126214 ~ 44137931 (+)

Expression


Co-expression Network