AMCG00016928 (dnajc7,LOC106607285)


Basic Information

Item Value
gene id AMCG00016928
gene name dnajc7,LOC106607285
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 35097590 ~ 35116668 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016928
GAAGTGTCGGTCTTCTCTCCCCCTGGCGGTAAGATGGCGGCTGTTGACTGCGATGTGCCCATGGATCAGGAACCCGAAATAATGAGCGAAGAGGAGCTAGAAAGgGAGGCAGAAGGCTTCAAGGAACAAGGAAATGCCTTTTACATCAATAAAGATTATTCTGAAGCATTTAACTACTACACAAAGGCCATAGACGCATGCCCAAAAACTGCCAGTTACTATGGGAACAGGGCTGCCACTCTGATGATGCTGGGCCGGATTCGAGATGCCCTGGAAGATGCCCAGCAGGCAGTGCGGCTGGATGACACCTTCGTGAAGGGCCACCTGCGAGAAGGGAAGTGCCACCTGTCTCTGGGCAATGCCATGGCAGCTAGCCGCTGCTTCCAGAAGGTTCTCGAACTGGAGCCTGACAACACCCAGGCCCAACAAGAGGTGAAAAATGCTGATGCAGTTTTGGAGTATGAGAAAATGGCTGAGTTTGGCTTTGAAAAAAGGGATTTCAGAAAGGTTGTGTTCTGTATGGATCGTGCCTTGGAGTTCGCCCCTGCCTGCCACCGCTTCAAAGTCCTGAAAGCAGAATGCCTGGCCTTGTTGGGACGCTACCCTGAAGCTCAGTCTGTAGCCAGtgacatTCTGCGGATGGACTCCACAAACGGGGACGCTCTGTACGTGCGTGGCCTGTGCCTGTACTACGAGGACTGTATTGACAAGGCTGTCCAGTTCTTTGTGCAGGCCCTGCGCATGGCCCCCGACCACGAGAAGGCACGTCTGGCTTGCCGAAATGCCAAAGCACTGAAAGCCAAGAAGGAGGAAGGCAACAAAGCCTTTAAAGATGGGAACTTTGAGGCAGCGTACGAGCTGTACTCTGAAGCTCTGACAATAGACCCCAACAATATCAAAACCAACGCCAAACTCTACTGTAACAGGGGCACAGTGGGGTCAAAGCTGAAGAAATTAGAACAAGCTATCGAAGACTGCACCAATGCAGTGAAATTGGATGAAACGTACATCAAGGCATATTTACGGAGAGCACAGTGTTACATGGACACAGAGCAGTATGAGGAAGCTGTGAGAGATTATGAGAAAGTGTATCAGactgagaaaacaaaagAACACAAACACCTCCTGAAGACTGCACAACTGGAACTGAAGAAGAGCAAACGAAAAGATTACTATAAGGTCCTGGGGGTGGACAAGAACGCCACGGATGATGAGATCAAGAAAGCGTACCGGAAACGAGCACTCATGCATCACCCAGATCGCCATAGCGGAGCCAGCTCAGAGGtgcagaaggaggaggagaagaagttCAAGGAGGTGGGGGAGGCCTTCACTGTCCTCTCGGACCCCAAGAAGAAAGCCAGATATGACAGCGGTCAAGATCTGGACGATGATGGCATGAACATGGGAGATTTTGACGCCAACAACATCTTCAAGGCGTTTTTCGGAGGTCCCGGAGGGTTTAGTTTTGAAGGTAATTCATcATCCGGACCTGGGAATTTCTTTTTCCAGTTTGGTTAAATGGGACGTCTCCGATTTGTTTGCAAAGTTCTCTCATGGACATTAAAGCGGACTCGCTTTCCCTCCCTAGTTTTAATGTTCCAGATATTTCTGTTTCTCAGTTGGATACCTCTGTATTTATGCTTGTATGTGAAGAAAAAAGTCATCTTGAGATATGGAGgggattaaacaaacaaataacactttttaaaaacatcacacaaaataaactattagaTATTAACAAAGGAAAAATGGTTCTTTCAAGAATTTGCTCGCCATAATTAGTACGTTTGTATTGATTTGGATTGCATACAGCGTCCTCAGAATGGGCAGATTGtactcatttgttttattttattgaagctGTCCGAGATCCATTATATACTTGGTTTATCCATAAGTTTAGTTTTTCCATACCCAAGAAGAATTGAGgcacctaaacttttttttttttttttttttttttttttttaattattcttgaTTT

Function

symbol description
dnajc7 Orthologous to human DNAJC7 (DnaJ heat shock protein family (Hsp40) member C7).

NR:

description
PREDICTED: dnaJ homolog subfamily C member 7 isoform X2

GO: NA

KEGG:

id description
K09527 DNAJC7; DnaJ homolog subfamily C member 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016928 True 1990 mRNA 0.46 14 35097590 35116668

Neighbor

gene id symbol gene type direction distance location
AMCG00016927 NA coding upstream 16342 35033815 ~ 35081248 (+)
AMCG00016926 NA coding upstream 82924 35010365 ~ 35014666 (+)
AMCG00016925 NA coding upstream 170259 34924190 ~ 34927331 (+)
AMCG00016923 NA coding upstream 323951 34761492 ~ 34773639 (+)
AMCG00016922 kat2a coding upstream 340589 34727405 ~ 34757001 (+)
AMCG00016930 NA coding downstream 5279 35121947 ~ 35131005 (+)
AMCG00016929 NA coding downstream 20881 35137549 ~ 35141789 (+)
AMCG00016932 klhl11,LOC107097235,LOC103373141 coding downstream 89212 35205880 ~ 35212613 (+)
AMCG00016933 NA coding downstream 103894 35220562 ~ 35232529 (+)
AMCG00016935 NA coding downstream 130839 35247507 ~ 35260480 (+)
G16705 nkiras2,kbrs2,LOC106607286 non-coding upstream 3498 35091459 ~ 35094092 (+)
G16698 NA non-coding upstream 276177 34821197 ~ 34821413 (+)
G16692 NA non-coding upstream 320543 34775825 ~ 34777047 (+)
G16668 NA non-coding upstream 361041 34736337 ~ 34736549 (+)
G16646 NA non-coding upstream 497673 34597822 ~ 34599917 (+)
G16728 NA non-coding downstream 67667 35184335 ~ 35234875 (+)
G16731 NA non-coding downstream 124111 35240779 ~ 35241527 (+)
G16771 NA non-coding downstream 146384 35263052 ~ 35265068 (+)
G16775 NA non-coding downstream 153965 35270633 ~ 35275819 (+)
G16778 NA non-coding downstream 162161 35278829 ~ 35279068 (+)
G16550 NA other upstream 996727 34100315 ~ 34100863 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other upstream 997994 34093276 ~ 34099596 (+)
G16546 NA other upstream 1049870 34047371 ~ 34047720 (+)
AMCG00016901 NA other upstream 1423229 33668593 ~ 33674361 (+)
AMCG00016898 NA other upstream 1447510 33630012 ~ 33650080 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other downstream 41929 35158597 ~ 35204232 (+)
G17193 NA other downstream 3379383 38496051 ~ 38503632 (+)
AMCG00016979 NA other downstream 4122405 39239073 ~ 39254490 (+)
G17697 NA other downstream 7274629 42391297 ~ 42397787 (+)
AMCG00017078 LOC106565757 other downstream 9009546 44126214 ~ 44137931 (+)

Expression


Co-expression Network