AMCG00016945 (mtmr14)


Basic Information

Item Value
gene id AMCG00016945
gene name mtmr14
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 35775076 ~ 35785159 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016945
gtGGAGAGAATTGAGAAGCGATGTTTGGAATTGTTCGGCAGGGATTACAAGTACAGTGTGATTCAAAATACCAATGGCGAGGTCTGTGGCCACTACCCCAGACAGATTGTCTTTCTGGAGTACGAGAGCTATGAGCACGACAAAGACAGgtTTGAGAGTACAGTCAAGATTGGCAAACTGCAGGACCTAGTGAATCGCAGTAAAATGGCTCGCTGTCGGGGGAGATTTGTATGTCCAGTTATCCTCTACAATGGCAAGcACATCTGTCGATCGTCCACCCTGGCTGGCTGGGGAGAGCTATATGGACGTACTGgctataattacattttttca

Function

symbol description
mtmr14 Predicted to enable phosphatidylinositol-3-phosphatase activity. Acts upstream of or within several processes, including muscle cell cellular homeostasis; musculoskeletal movement; and regulation of autophagy. Human ortholog(s) of this gene implicated in centronuclear myopathy 1. Orthologous to human MTMR14 (myotubularin related protein 14).

NR:

description
PREDICTED: myotubularin-related protein 14 isoform X1

GO:

id name namespace
GO:0050881 musculoskeletal movement biological_process
GO:0035335 peptidyl-tyrosine dephosphorylation biological_process
GO:0010506 regulation of autophagy biological_process
GO:0046716 muscle cell cellular homeostasis biological_process
GO:0009790 embryo development biological_process
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016945 True 333 mRNA 0.47 3 35775076 35785159

Neighbor

gene id symbol gene type direction distance location
AMCG00016943 NA coding upstream 151426 35623350 ~ 35623650 (+)
AMCG00016941 NA coding upstream 219880 35553222 ~ 35555196 (+)
AMCG00016935 NA coding upstream 514596 35247507 ~ 35260480 (+)
AMCG00016933 NA coding upstream 542547 35220562 ~ 35232529 (+)
AMCG00016932 klhl11,LOC107097235,LOC103373141 coding upstream 562463 35205880 ~ 35212613 (+)
AMCG00016946 NA coding downstream 17989 35803148 ~ 35848748 (+)
AMCG00016948 NA coding downstream 317207 36102366 ~ 36202202 (+)
AMCG00016947 NA coding downstream 456230 36241389 ~ 36252215 (+)
AMCG00016949 NA coding downstream 514213 36299372 ~ 36301893 (+)
AMCG00016950 NA coding downstream 715890 36501049 ~ 36524631 (+)
G16814 NA non-coding upstream 325905 35399828 ~ 35449171 (+)
G16806 NA non-coding upstream 393293 35381497 ~ 35381783 (+)
G16788 NA non-coding upstream 423156 35351577 ~ 35351920 (+)
G16784 NA non-coding upstream 468351 35306489 ~ 35306725 (+)
G16779 arhgap23,LOC103363845 non-coding upstream 492316 35282171 ~ 35282760 (+)
G16863 NA non-coding downstream 113048 35898207 ~ 35898516 (+)
G16969 NA non-coding downstream 896180 36681339 ~ 36681552 (+)
G16984 NA non-coding downstream 1187905 36973064 ~ 36973283 (+)
G16990 NA non-coding downstream 1462269 37247428 ~ 37303443 (+)
G16998 NA non-coding downstream 1628955 37414114 ~ 37418704 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other upstream 570844 35158597 ~ 35204232 (+)
G16550 NA other upstream 1674213 34100315 ~ 34100863 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other upstream 1675480 34093276 ~ 34099596 (+)
G16546 NA other upstream 1727356 34047371 ~ 34047720 (+)
AMCG00016901 NA other upstream 2100715 33668593 ~ 33674361 (+)
G17193 NA other downstream 2710892 38496051 ~ 38503632 (+)
AMCG00016979 NA other downstream 3453914 39239073 ~ 39254490 (+)
G17697 NA other downstream 6606138 42391297 ~ 42397787 (+)
AMCG00017078 LOC106565757 other downstream 8341055 44126214 ~ 44137931 (+)
G18192 NA other downstream 8869493 44654652 ~ 44656098 (+)

Expression


Co-expression Network