AMCG00017043


Basic Information

Item Value
gene id AMCG00017043
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 42758813 ~ 42793348 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017043
GGGCTGCTCTTCATTGTGCACGGGGCGGGGGAACACTGTGGCGGCTACAGCGACCTGGCCCAGATGCTGGCTGAACACtccctgctggtttttgcaCACGACCACCTGGGCCACGGGCAGAGCGAGGGGGACCGCATGGTGATCTCAGACTTCCACATCTTCATCCGGGACTCCCTGCAGCACATCGACCTGATGAGGAGCCGACACCCTGGCCTGCCTGTCTTCGTCGTGGGCCATTCCATGGGAGGAGCCATTTCCATCCTCACAGTGTGCGAGAGACCAAATGACTTTGCTGGGGTGGTTCTCATCGCGCCCATGGTCCAGATGAACCCCGAATCCGCCACCCCTTTTAAGGTATTCATGGCCAAGCTGCTAAACCACCTGGTGCCAAGTATGTCCTTAGGGGCAATTGATTCCAAATGGATCTCCCGCGACCAGAAAGAGGTCCAGGCCTACGATGCCGATGTTCTGAATTACCACGGGGGCCTGCGCATCTCCTTCGGCATGCAGCTCATGAATGCCGCCACCAAGATCGAGAAAGCTCTGCCCGGGATCAGCTGGCCCTTCCTGCTTCTCCACGGAGACAACGACAAGCTGTGCGACATCAAGGGCTCCCAGATGATGCATGAAAAGGCACAGAGTCAGGATAAGAAACTCAAGGTGTACAGCGGGGCCTATCACGCCCTGCACCACGAGCTCCCAGACACGACCAGCTCCGTCCTCAAAGAGATTAGCACTTGGATTGTCCAGAGACTCCCGGAAGAAGATTAAACGCAGTTGTGGAGGCGCAGCCAACTCACTTCAGCTTGTTTGCTTCAGGCTGATCTTGGCCTGTGTTTAATCAGCACGGTTTCTTTGCAGTAATGATATACCgtgttaaataatgaaaaaataaaaaaacaccaacaacagcCCCACCAACAACAAAACCGTGCTGTTAAAGCCACTTCTCAAACCAGGCTTACACAAGCAAGTGATAAAATCAGCCACCAACCACAGCGATTACTGCCTACAGCATCCTACAAACCCTCATTCTTTCTAACCAGCATCTTAATcagacattttcaaagcaggtgaattaatgtattcatttgtacTGTGGGGGTGTGGGTCATCTTGGGTTTGAAATATTACATCATACTAGGGGTATTTCTCTGTTTAGTTATGTGGGAATGGTTAAGCAAGAGTAACCAGTGAGTATGCACTTCTATGACATGGAAAGCTCTTTTTTATGGCTCCTGATTGTGGCCATAAAGCGGTGGAGTTCTTCAGGGAGGGATTTCTGAACAACTCTGGGTGATTATTACATACAAAGGGGTAAAAGTGCCTGTGAATTTCTTTGCtatattgtttctgttacaGGCATGTTCACCAGGAAGAGAAGATCAATTACActaacataaatatatgttatatCCATTTATATGTCACTCATTTAAAAACGTTCTGTTTTCACAGGTTTGGGAGACTTTAGAAACTTGAATTACATAATCAAGCAGCTACTGATGTGTCATTTactgggaagaaaaacacagcactgtacTTTAACTGCATAATCCCACAATGCAAAGTGCATGGCTTCTCTGCTTGAGTCACTGCTTTGCTGAAATCTATGAATTTCAGTTTGCAAAAGTTGCAATTGagttattttgtctttgtttcattttggcGCATGCCTTCTAATGCACTGTTCTATTGTTTGTTAATATGCTACTCCCccatgaaatatgaatataaacaatATCTTATTGTGATGATGAAAAAAAACGCATCCTTAATCCTCTGAGGGTGGGAGGGGGATGCAAGCCCTTGCTGGCCATTTtaagaattatacattttcctaacatctagattagaaaaagattgggaaaatgtactgttttttttttttttttgtcgttttAGTAGTGTAAATAGTCTGGATTTGGTTAGTACTGTTAAGCGCATGTAGTCACAGTGGCCTCGCTTCATAGTAGAAGAAACAGAAATTACCAAAAAGATTCCTATTGTAGAAATAATGCACATCATTCAGCAATCGTGTGCACTTATACACTGTCACTGTAAGTTTAAGCCCAGTTATTGGTCAAAACCCAAAGTAAACCGTGTTGGGTTAACGGCACTGATGAGAGTGGTACTCAACACACCACGGTCCCTTCCCCTTTTCCAGAATGTGATTTCTTCATGAATAGGACCATTTGAATGTGAAGCTTTGCTGATACCCAGCAGGACCCAATATTGCTCAACATCATCCCATATACAAAATCCCTGCAGTACGTGCTCTCAAAGGAGTTTACCATCACCAATGTTATTTCAGCTATTTCTGCTTGTCCTGTGCTTCAAAGTGGATGAGAACATTCAAATCTTTTGGCTGGGCTTAAACTAACATACTCCCCCACTTCACTTGCTGCCTTTGGGGAATTTAGATCTTTTCTATTTAAAGCCCTTTGCTTTTTCAGCTTTGCCGGATGGAAATGTGCTTCTTTCTTGTGTACTCCCCTACCATCAGTCTAGAGATGTCAGTTCACGAGATCCATTTATTGGAGTATATCATTATGACAGATTCTATTAAAGCGAGAAAGCGTGATAGGGAGTCACAGCGGACCTATTTAATAGGACAcagaacaaacaagaaaacgCACCAGCTGGAAAGCACATAGAAGACTTAGCACTTTTCAGTAGGGCAGGGCAGATTTGGGATCAACCCTTAAAGTGTGATAGCTTTTATTACTAGGAACGGAAACTCACGTTCAAAACCAGTAGTGGGCAACTGTGTTCTCAGATGGCCGCAGTCCCAATTAAACCGATTAAAATTCTTCACGTTCTTTTAATTTGGTTCGAATAGGCTGCTGAGCTCTCAGCTGGAACGTAACCTCCAAGTGGCCCTCCAAGACCAAAGCTGTCATCACTGTTTTGAATAGAGTTTTAAACTAAACGTTTGGAGCAGGACAACCACAATCTCATGCCTGACAGCGGCCTACCCAGGCTTAAGCATCCAGAAACAAATGCACCTTCCCCGCATgggtgtgttgtgctgtaggGAAGTGCACATTTGAAGTGGGTTGCAGTGTAAGTGGGACATTTTACTGATTTGCCTTTAAAGATCTAATCTTCTCTCAAGGGAAGAAGAGCTGCTGGTTTATATAGATCTGtgcagcaaattaaatatattttcagttactGTTTAAACCATTGCATGCTTGAAATGTCAATGTCACAGGTTCAATATTTGCATTTAGAAAAGGCAAAGCCACAGCTTAAActcaacaaaaatatttttctatccTTATTTATTTGGGAACACATTATGTGTATGCTATctgcttgtttaaattgtttcatattcatatttaactgCACATTTTATGTCTGACATCTCTATCTTTGTTGTCTGAAATGTAAATAGGAATATATGTAGTGTGAACATCTATTTATATACGGCTTTGTCACTTTCATAAGGTCATAGGTTGACAGGAAAAAAATCGATGTGTTTTGAATGAATGTATTGCTTGGAAAATCAATTAATGCTTTGTTAAATGTCCTTTTGTTCACCATGTTTCTACTAATCTTGCATGggtactgtataaatatataaaatcactaCATTATTTCCACAAAAAGCTGGTACATTGATTAACTGACAGAAAAATAAGATACTATAGATCTATGGCAGTTGGGGAGAAgtgaagagagaaagaaaatacaacaaatagcCAATTTGAATCCATTGTGTTTGTCtaacaatcaataaaatcaaaagtagACAGTATAGCAACTGAAGCAGCAGTGTTTGTGAGTCACATTGAATGTTGCTAAGGGAAGCTGTCTATTCTGTCATTTCTTTCACAGAGAAAGGAAATTACCGGGGCACAGTCCTATCAGTAATAATGAAAGAATGCAATATTTCCCATCATTGATGCATTGTCTCAGCCTTATATTAAGATCAGTGTTATAATGGAAAAGTCTATTAGTTGTTCATGAACAATTGACCGCAGGATAGCTTGGGTCCATGTTACACAGTGAAAGGCAGTGAACTTCCACCCCAGATAAATGGACTGCACTCTTATAGAACTGATCACAAAAAGGAACATATCAATTCATAATGAAGACCCTATAGCCAAGgcaataatgttttattctttctcgAGTAACACGGAAGAACACAATCTTAATAAACCATACCATTTTAAGTGGGTAGTACTTATTCTGCAAACTACACTGTTCTAGTGGTCTcaggaaataaaaaggataTACAATGTTACATTATAAAAAGTAATGCATTCTCTtagttactttatttttgtatacttcTAAATACTGAGGTGTTTGATGAAGGTTAGCACTGGACAGAAGGAGGTGTCTTGGGTGTCCTAAAAGCTGAATTTCCTTTgacttctttttgttttattttatgttatactTAATATGCCTTTTTGAAggcattttttaatgttgtttaattCATCTGGTTCTGTTGAGAAGCTATGAATGTGGTGTATGTCATCAATGGAGAGACAGGATGGGGGAATTTTGGTTGAATCCATGGATTTATCATGTTGTACATTTGATGTCATAATATACTGTGAAATcaggtggaaaataaataaacccagtAACCTAA

Function

GO: NA

KEGG:

id description
K01054 MGLL; acylglycerol lipase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017043 True 4618 mRNA 0.41 6 42758813 42793348

Neighbor

gene id symbol gene type direction distance location
AMCG00017039 NA coding upstream 33591 42722477 ~ 42725222 (+)
AMCG00017038 NA coding upstream 39547 42715949 ~ 42719266 (+)
AMCG00017034 klhdc8b,LOC106572099,LOC106566462 coding upstream 94385 42649854 ~ 42664428 (+)
AMCG00017035 klhdc8b,LOC106572099 coding upstream 128142 42623989 ~ 42630671 (+)
AMCG00017037 LOC106572099,LOC106566462 coding upstream 164719 42582352 ~ 42594094 (+)
AMCG00017044 NA coding downstream 2850 42796198 ~ 42809702 (+)
AMCG00017046 ift122 coding downstream 27444 42820792 ~ 42844311 (+)
AMCG00017045 NA coding downstream 52357 42845705 ~ 42849666 (+)
AMCG00017042 NA coding downstream 57371 42850719 ~ 42852294 (+)
AMCG00017053 NA coding downstream 302290 43095638 ~ 43097515 (+)
G17580 NA non-coding upstream 780147 41976395 ~ 41978666 (+)
G17518 NA non-coding upstream 1016040 41742350 ~ 41742773 (+)
G17514 NA non-coding upstream 1041824 41713810 ~ 41716989 (+)
G17498 NA non-coding upstream 1068614 41688010 ~ 41690199 (+)
G17491 NA non-coding upstream 1085460 41671378 ~ 41673353 (+)
G17882 NA non-coding downstream 259738 43053086 ~ 43112636 (+)
G17909 NA non-coding downstream 442472 43235820 ~ 43236036 (+)
G17969 NA non-coding downstream 600945 43394293 ~ 43394499 (+)
G17988 NA non-coding downstream 676722 43470070 ~ 43470846 (+)
G17987 LOC107575789 non-coding downstream 706822 43500170 ~ 43500476 (+)
G17697 NA other upstream 361026 42391297 ~ 42397787 (+)
AMCG00016979 NA other upstream 3504323 39239073 ~ 39254490 (+)
G17193 NA other upstream 4255181 38496051 ~ 38503632 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other upstream 7554581 35158597 ~ 35204232 (+)
G16550 NA other upstream 8657950 34100315 ~ 34100863 (+)
AMCG00017078 LOC106565757 other downstream 1332866 44126214 ~ 44137931 (+)
G18192 NA other downstream 1861304 44654652 ~ 44656098 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other downstream 2155686 44949034 ~ 44961601 (+)
AMCG00017167 NA other downstream 6578674 49372022 ~ 49382218 (+)
AMCG00017173 NA other downstream 6609183 49402531 ~ 49403845 (+)

Expression


Co-expression Network