AMCG00017211


Basic Information

Item Value
gene id AMCG00017211
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 50645112 ~ 50652585 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017211
ATGTCCAGCAGAGGGAAAGCTTCTCGAAGCATGTCGATCGTGATGGTGTTCGAGAAGCCCAAACTGGGAGAGCAGTTTCTGAAAAGCCTTCTTGGCAGCCGGGATGGGCGTCCTTCCCCGGACAAGAACCCCGTCAATGTCAAACAGGAGGCCAAAGCCTGGCTGGGACTGAAAGAaaaggagggggtggggggagaaaaaacaagATTTGGCCACGGGACTTTCCTGGTCTGCTTAGAAAACATCTTCAAGAAGATTACGGGTAAAGATCTGAAGTATGAGGCCCTGGTGGGGAAACCGAGCGAGGTCACCTACCACTACGCAGAGTATCTGATCAGGGCCCAAGCTGAAGAGAGGAGCTGGAGGAAGCCGATCAGAACCCTGTATGCCGTTGGGGATAATCTCATGACTGACATCTATGGCGCTAACCTGTACAATCGCTACCTTGAAGAGCGCACCTCCCGGAAGAGCTCCCAAGCCCGGGCCAAGGTGGCCTCCGGCACCGGGACGTCCGGCACCACCGTGTCCCAGGAGGTGGAAGTGGACAATGCCTGGGAGAGCGAGCTGGCGGCCCCCTCCGCCACGGCCTGCAAGTCTGTATTGGTCTGCACAGGGGTCTATAACCCGCGCACGGAGGTGCCCGCCGACCACAGCGAGTCCATCATGGAGACCGTGTTTCACGGCCACAGGGACTTCCGCTTCGACCCGGCCCTGGTGGAGCCGGACCACATAGTTCAGGATGTCGATGATGCCGTGGAACTTATTTTCGAGCAGGAGAAATTTGTGACTCCGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017211 True 795 mRNA 0.57 4 50645112 50652585

Neighbor

gene id symbol gene type direction distance location
AMCG00017210 isy1,LOC108431508,LOC107700632,LOC108254962 coding upstream 6144 50632108 ~ 50638968 (+)
AMCG00017212 LOC106583855,LOC107742030 coding upstream 23165 50615239 ~ 50621947 (+)
AMCG00017207 NA coding upstream 107442 50526813 ~ 50537670 (+)
AMCG00017206 NA coding upstream 122570 50517042 ~ 50522542 (+)
AMCG00017205 NA coding upstream 131757 50501043 ~ 50513355 (+)
AMCG00017209 NA coding downstream 11741 50664326 ~ 50672185 (+)
AMCG00017217 NA coding downstream 44261 50696846 ~ 50711492 (+)
AMCG00017225 hdac11 coding downstream 308248 50960833 ~ 50972601 (+)
AMCG00017224 LOC107685648,LOC107727860,LOC107691382,LOC107581396,LOC107749433 coding downstream 332674 50985259 ~ 50989853 (+)
AMCG00017227 NA coding downstream 396036 51048621 ~ 51068325 (+)
G19152 NA non-coding upstream 4310 50640587 ~ 50640802 (+)
G19146 NA non-coding upstream 13478 50631378 ~ 50631634 (+)
G19062 NA non-coding upstream 293165 50351252 ~ 50351947 (+)
G19061 NA non-coding upstream 302962 50341417 ~ 50342150 (+)
G19059 NA non-coding upstream 310606 50333760 ~ 50334506 (+)
G19195 NA non-coding downstream 75155 50727740 ~ 50728151 (+)
G19245 NA non-coding downstream 484708 51137293 ~ 51138835 (+)
G19275 NA non-coding downstream 643247 51295832 ~ 51296718 (+)
G19292 NA non-coding downstream 687328 51339913 ~ 51340117 (+)
G19366 NA non-coding downstream 912704 51565289 ~ 51571994 (+)
G19114 raf1,LOC108276324 other upstream 81834 50559450 ~ 50563278 (+)
G19113 NA other upstream 92127 50551880 ~ 50552985 (+)
AMCG00017183 NA other upstream 917545 49713467 ~ 49727567 (+)
AMCG00017173 NA other upstream 1241267 49402531 ~ 49403845 (+)
AMCG00017167 NA other upstream 1262894 49372022 ~ 49382218 (+)
AMCG00017280 NA other downstream 2161668 52814253 ~ 52817369 (+)
AMCG00017287 NA other downstream 2168476 52821061 ~ 52834042 (+)
G19683 NA other downstream 2683324 53335909 ~ 53339655 (+)
G19754 NA other downstream 2850847 53503432 ~ 53536464 (+)
G19829 NA other downstream 3137962 53790547 ~ 53792694 (+)

Expression


Co-expression Network