AMCG00017229


Basic Information

Item Value
gene id AMCG00017229
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 51169613 ~ 51176459 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017229
ATGGCCAGTGCATCGTGTTTTATCTTTCCTGTGACAATTAGCAAGCTCTGCAAGGCCAAGGTCTCCCACTCACATGAACTTGGTAGTGGAAGTGACGGGGGTTGGACATACGGACAGCGGcttcagccaatcagagagcgCACAACGGTCCGGGTTAACCAACCAGAAGAAGAAGGGGGCGGGATTTGGAGCATCAAGCAACTGAAAGACTTCAAGGATGATCTCAATTCAACCTCCAAAGAAGTTAAAGCCTTGATTAACAGCCTGGGCCACAGCATGATAAAGGAGATACAACTGAAAGTATCTGTCCTGAAGAAGATGGTGGACATCGAGTGCGATTTGAAGGTTGGTGATCTGAACAACACTCTGCGTGAACTAGAGGAGCCGCAGCAGCTCTTCCTGAAAATGCAGAAACTgctgcaaacacacagcagccctGCTGAGTTTCTGGAGGAATGCACACACCTCAGTGACGAGGCCGAGAACCGCGTTCAAGACGACATCGTGCCACCGCCGCTGAAGAAGGAAAGCATCTCCATTGGGATGTATGTAGAGATGCTGCTGACAAGTGTGAAAATTAAGAAAGTATCCAAGTCAGGCCCAAGTAGCATTCTTGGGAGACTCTCTGAGGAATACAATGCATGGAGATTAGGCTGTTCAAACGTTGACCTAACCTCCTATGATGGCCTGGATCAGCTGATACGTGATTCTGTGTCATTTGCATCACTCTATCCCGACTCAGCCAGTAGCATAAGCTCGTCCGAGGAGAGCAGCACGGATGGAGACATGGAGGAAAGGCTTCAGCactttttctga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017229 True 816 mRNA 0.49 3 51169613 51176459

Neighbor

gene id symbol gene type direction distance location
AMCG00017226 NA coding upstream 4365 51159919 ~ 51165248 (+)
AMCG00017227 NA coding upstream 101288 51048621 ~ 51068325 (+)
AMCG00017224 LOC107685648,LOC107727860,LOC107691382,LOC107581396,LOC107749433 coding upstream 179760 50985259 ~ 50989853 (+)
AMCG00017225 hdac11 coding upstream 197012 50960833 ~ 50972601 (+)
AMCG00017217 NA coding upstream 458121 50696846 ~ 50711492 (+)
AMCG00017231 NA coding downstream 35720 51212179 ~ 51212391 (+)
AMCG00017230 NA coding downstream 37800 51214259 ~ 51214516 (+)
AMCG00017243 NA coding downstream 463178 51639637 ~ 51640615 (+)
AMCG00017238 NA coding downstream 470945 51647404 ~ 51649518 (+)
AMCG00017237 NA coding downstream 477071 51653530 ~ 51663841 (+)
G19245 NA non-coding upstream 30778 51137293 ~ 51138835 (+)
G19195 NA non-coding upstream 441462 50727740 ~ 50728151 (+)
G19152 NA non-coding upstream 528811 50640587 ~ 50640802 (+)
G19146 NA non-coding upstream 537979 50631378 ~ 50631634 (+)
G19062 NA non-coding upstream 817666 50351252 ~ 50351947 (+)
G19275 NA non-coding downstream 119373 51295832 ~ 51296718 (+)
G19292 NA non-coding downstream 163454 51339913 ~ 51340117 (+)
G19366 NA non-coding downstream 388830 51565289 ~ 51571994 (+)
G19465 NA non-coding downstream 930489 52106948 ~ 52116341 (+)
G19515 NA non-coding downstream 1371290 52547749 ~ 52548031 (+)
G19114 raf1,LOC108276324 other upstream 606335 50559450 ~ 50563278 (+)
G19113 NA other upstream 616628 50551880 ~ 50552985 (+)
AMCG00017183 NA other upstream 1442046 49713467 ~ 49727567 (+)
AMCG00017173 NA other upstream 1765768 49402531 ~ 49403845 (+)
AMCG00017167 NA other upstream 1787395 49372022 ~ 49382218 (+)
AMCG00017280 NA other downstream 1637794 52814253 ~ 52817369 (+)
AMCG00017287 NA other downstream 1644602 52821061 ~ 52834042 (+)
G19683 NA other downstream 2159450 53335909 ~ 53339655 (+)
G19754 NA other downstream 2326973 53503432 ~ 53536464 (+)
G19829 NA other downstream 2614088 53790547 ~ 53792694 (+)

Expression


Co-expression Network