Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017230 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 51214259 ~ 51214516 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0002053 | positive regulation of mesenchymal cell proliferation | biological_process |
| GO:0051216 | cartilage development | biological_process |
| GO:0060037 | pharyngeal system development | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| GO:0000976 | transcription regulatory region sequence-specific DNA binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017230 | True | 258 | mRNA | 0.67 | 1 | 51214259 | 51214516 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017231 | NA | coding | upstream | 1868 | 51212179 ~ 51212391 (+) |
| AMCG00017229 | NA | coding | upstream | 37800 | 51169613 ~ 51176459 (+) |
| AMCG00017226 | NA | coding | upstream | 49011 | 51159919 ~ 51165248 (+) |
| AMCG00017227 | NA | coding | upstream | 145934 | 51048621 ~ 51068325 (+) |
| AMCG00017224 | LOC107685648,LOC107727860,LOC107691382,LOC107581396,LOC107749433 | coding | upstream | 224406 | 50985259 ~ 50989853 (+) |
| AMCG00017243 | NA | coding | downstream | 425121 | 51639637 ~ 51640615 (+) |
| AMCG00017238 | NA | coding | downstream | 432888 | 51647404 ~ 51649518 (+) |
| AMCG00017237 | NA | coding | downstream | 439014 | 51653530 ~ 51663841 (+) |
| AMCG00017246 | LOC106571974 | coding | downstream | 509183 | 51723699 ~ 51725528 (+) |
| AMCG00017248 | LOC107743249,LOC106566685 | coding | downstream | 543209 | 51757725 ~ 51827775 (+) |
| G19245 | NA | non-coding | upstream | 75424 | 51137293 ~ 51138835 (+) |
| G19195 | NA | non-coding | upstream | 486108 | 50727740 ~ 50728151 (+) |
| G19152 | NA | non-coding | upstream | 573457 | 50640587 ~ 50640802 (+) |
| G19146 | NA | non-coding | upstream | 582625 | 50631378 ~ 50631634 (+) |
| G19062 | NA | non-coding | upstream | 862312 | 50351252 ~ 50351947 (+) |
| G19275 | NA | non-coding | downstream | 81316 | 51295832 ~ 51296718 (+) |
| G19292 | NA | non-coding | downstream | 125397 | 51339913 ~ 51340117 (+) |
| G19366 | NA | non-coding | downstream | 350773 | 51565289 ~ 51571994 (+) |
| G19465 | NA | non-coding | downstream | 892432 | 52106948 ~ 52116341 (+) |
| G19515 | NA | non-coding | downstream | 1333233 | 52547749 ~ 52548031 (+) |
| G19114 | raf1,LOC108276324 | other | upstream | 650981 | 50559450 ~ 50563278 (+) |
| G19113 | NA | other | upstream | 661274 | 50551880 ~ 50552985 (+) |
| AMCG00017183 | NA | other | upstream | 1486692 | 49713467 ~ 49727567 (+) |
| AMCG00017173 | NA | other | upstream | 1810414 | 49402531 ~ 49403845 (+) |
| AMCG00017167 | NA | other | upstream | 1832041 | 49372022 ~ 49382218 (+) |
| AMCG00017280 | NA | other | downstream | 1599737 | 52814253 ~ 52817369 (+) |
| AMCG00017287 | NA | other | downstream | 1606545 | 52821061 ~ 52834042 (+) |
| G19683 | NA | other | downstream | 2121393 | 53335909 ~ 53339655 (+) |
| G19754 | NA | other | downstream | 2288916 | 53503432 ~ 53536464 (+) |
| G19829 | NA | other | downstream | 2576031 | 53790547 ~ 53792694 (+) |
