AMCG00017237


Basic Information

Item Value
gene id AMCG00017237
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 51653530 ~ 51663841 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017237
CAAAAAGCTTGCATAACCCCACTTATGTTTGCCTGGATTACCAACCCACTGAGCAAATTGCAGGAATGGCACCAGTGCCCAAAGTCCAGCTGTCCGGAGGCCTCGAAATCTGTcgtattttaaatggcatgtGGCAGGTATCTGGGGCTCATGGACCCATCGACTCCGCTAAAGCAGCCAAGGCAATGGATGCTTATGTCAATGCTGGACTAACATCTTTTGACATGGCTGATATATATGGACCAGCAGAAGAGATATTTGGAAGCTTTTATAGCCAGCTCAAATCCAGACAAGGCGCAGAAGCTGCCGCGGGAGTCCAGGGCCTGACCAAGTGGGTTCCGCGTCCAGGACCCATGACAAGAAAGGGCCCTGTTTCCCGCTTTGAGGACAGATGTGCAGAAGGGGCTGAGGTGGCAGAGCATGCTGTGGACCAGTCCCTGAGGAGAATGTGTGTCGAATGCCTGGACTGTCTGCAGTTTCACTGGTGGGATTACAGTGATAAAAGATACCTGGATGCACTGGGGCATCTGTCAGATCTCCAGCAAGAGGGGAAAATAaAGGAACTTGCGCTCACCAACTTTGACACCCAACGTCTGGAGGAGATCACCAGCAAAGGTATCCACATCTCCAGTAATCAAGTCCAGTACTCGCTGATTGACAGACGGCCGGGGGTGAAAAtggcaaagttttgtcagtctgAAGGAATTCAACTCCTGACGTATGGAACTCTAGGTGGTGGTCTGATCAGCGAGCGTTACCTGGGGACTGGGGAGCCCACGGGCCGAGGGCAGCTCAACACGGCCTCCCTCAGCAAGTACCACAACATGATCAAGCTGTGGGGCGGGTGGGGGCTCTTCCAGGAGCTGCTGTCCACGCTGAGCTCTCTCGCCCAGACCCGCGGCTGCTCCATCGCCAACGTGGCCACCAGCTACGTCCTGGACCAGCCGGCCGTGGCAGGGGTGATCGTGGGCTGCCGTCTCGGGGTCCCTGGGGCTGAGCACATCGCGGACACACTTGGGACCTTCCAGGTCCGCCTCTCTCCGGCCGACATCGACGGTATCGAGAGTGTGTTGGGCCGCTCGAAGGACCTAATGCTCACGGTCGGGGACTGTGGCAATGAATACAGGAACTAGAGGAGACAGGATTCGGGGCAGGAGGACCCATTCCAACGTAACTTGTACAGTGCCCACGTGTGACCAGAAATGTATCCGAAATGCCCCAAGGTCATGTGCACATACatgtgaacaacaacaaaaaaggctgTGCTTACTAACTCTGTGTGCATTTACTGACTGAGTAGTTAGCTTTAGTGTGATTAATATAATCTACAATCAGTTTATCTGTGTTTAAACCACTAGAGGCTGTTAATTTCCCATTCAGTCGTACCTGTTCTCATTGGGTTTCTGTTATGGCACCAAATCAGTTTAATTGTTGTGCAGCTGTTAAAACAAGCTCTGCTCTctgtgatgcattttaaatacaaaataacacttGCATGCGATTGACACAGCTTTAATACACTAAAAAGGTCATTTGAATGTTGTCACACAGTAACGCATCCCTTCATTTCCTATAAAAAAGAAGTAATTCAGctaaagaaacataagaaagtgtgcAATCGAGAGGAGGCGCAGAACATACAGGGAGACtggagtgttttcttttttctttgtaactCAAAGGATAAGTAAATGTGAATTAACTCTGGGGCAGAAGGGATGGGGGTGCTGAGACTTAAAGAGGAAACCGAGATTTGACGTAGACCGGATCGAGCAGCTGCACtctaatgagagagagacaagtgCATGCAAATGCATCCGTTCAGTGCGAGCCTCGTAGGAAGGGTCCTCAGGCAATATTGGCCATGAACGcagcttttctgtctttttattgGACGCTGTTTAATACAAAGCAGCCCCGTCTCGCTCGTATGATCTGTATCAGTCGTGACGTTGCTGTGTGTGCGATCTGTTTTACAATTCCCTGGGCATCGCCTCGCCTGTCGAAATACTGCGGCCGTCCTTCGCCGTCTGAAAAAGCAGGGATACGACCATACCCTGTTGTGTACATATATCAGGGCAGCTTTAATAAGGTTAAAACATTTGGGTTTTGTGCATTTGTTCTGAAAATGCATGAGATGGTTGTGAAAAACACCCTTATTAGAGATGAGTCTAGACGAGTGATAAAACAGTCAGGTGACAAGGAAGAGAAATCCCCAGGTCGTTCCTTCCTCAACCTTTTACCCGGTGAATGGTGGCGTTATCTGAAACTGCAGAACTTAATCATCAACAATGGATGcggattattaataataataataataataataataatttcttggcagacacccttatccagggccacATTTGAACTGGAGTATGTTATTCAAAATGTTCTTATTGCATTAATCACAGTATTTCacaattatatttcaattgaaaacaaaagtgaaacaatTGTAGAGTGTCTGGGACTTTCTGTTGCATTTAGATTGCAGTATTTGTACATGAACAGAGAACTGTCAGCTGGGTGTCATAAAACGATTGTTCTCACAATTGCatgttgtattaataaaacagggTAGGTGAAGACAGGACAGACAGGACTTCAGAAAGGTACTTCTGCTTGATCTGGTTTAGAGTCCTTCGCTTCACATGCATTTGACATGGTAAGGGTTTTGTCTCTCTGATGGTTTCCTGTAGGATTGTTGGCTTTCATTTGTGacgaaaatataataaaaatgtttgtgacaGCATATATTGTACAGGTATTACACTGAGTTTTTAGGTCATATATTACTTagcttttaatgttaaaaacacatttttaaagaatttgGCAACCGAGTTCTGTTTTGTACGTACTTTACATTATGAAAAGTATTATCTACAGGTTGACTTTTGCAGATGACGCAAGATATTGTCGTAAATAACACTTTCTATATCTCTCTGAATGGATTGTTAAAGGGGAACTCTGGCTTTGTTGATGTTTACACTTCATCAGTTAAgagtaaaaacatatattcCAAGGAAAgaaatacaccaatcagccataacattatgagcactgacaggtgaagtgaataaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017237 True 3088 mRNA 0.45 8 51653530 51663841

Neighbor

gene id symbol gene type direction distance location
AMCG00017238 NA coding upstream 4012 51647404 ~ 51649518 (+)
AMCG00017243 NA coding upstream 12915 51639637 ~ 51640615 (+)
AMCG00017230 NA coding upstream 439014 51214259 ~ 51214516 (+)
AMCG00017231 NA coding upstream 441139 51212179 ~ 51212391 (+)
AMCG00017229 NA coding upstream 477071 51169613 ~ 51176459 (+)
AMCG00017246 LOC106571974 coding downstream 59858 51723699 ~ 51725528 (+)
AMCG00017248 LOC107743249,LOC106566685 coding downstream 93884 51757725 ~ 51827775 (+)
AMCG00017247 NA coding downstream 174742 51838583 ~ 51844854 (+)
AMCG00017252 cacna2d3,LOC103362818 coding downstream 284376 51948217 ~ 51985368 (+)
AMCG00017253 cacna2d3,LOC103362818 coding downstream 341379 52005220 ~ 52015155 (+)
G19366 NA non-coding upstream 81536 51565289 ~ 51571994 (+)
G19292 NA non-coding upstream 313413 51339913 ~ 51340117 (+)
G19275 NA non-coding upstream 356812 51295832 ~ 51296718 (+)
G19245 NA non-coding upstream 514695 51137293 ~ 51138835 (+)
G19195 NA non-coding upstream 925379 50727740 ~ 50728151 (+)
G19465 NA non-coding downstream 443107 52106948 ~ 52116341 (+)
G19515 NA non-coding downstream 883908 52547749 ~ 52548031 (+)
G19588 NA non-coding downstream 1133091 52796932 ~ 52802211 (+)
G19591 NA non-coding downstream 1187090 52850931 ~ 52854722 (+)
G19617 NA non-coding downstream 1194312 52858153 ~ 52863723 (+)
G19114 raf1,LOC108276324 other upstream 1090252 50559450 ~ 50563278 (+)
G19113 NA other upstream 1100545 50551880 ~ 50552985 (+)
AMCG00017183 NA other upstream 1925963 49713467 ~ 49727567 (+)
AMCG00017173 NA other upstream 2249685 49402531 ~ 49403845 (+)
AMCG00017167 NA other upstream 2271312 49372022 ~ 49382218 (+)
AMCG00017280 NA other downstream 1150412 52814253 ~ 52817369 (+)
AMCG00017287 NA other downstream 1157220 52821061 ~ 52834042 (+)
G19683 NA other downstream 1672068 53335909 ~ 53339655 (+)
G19754 NA other downstream 1839591 53503432 ~ 53536464 (+)
G19829 NA other downstream 2126706 53790547 ~ 53792694 (+)

Expression


Co-expression Network