AMCG00017246 (LOC106571974)


Basic Information

Item Value
gene id AMCG00017246
gene name LOC106571974
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 51723699 ~ 51725528 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017246
CTCTGGCATATTCTGCTCACGTATCACAACACCTGGTTCGTGTATCCTGAGGGTGATAGGAAGCTGAGGCACGAGGACCAAAATCATGGGGCAAATTATGCCAGCAGCACCAGAGTACCTCTCCCTGGTGACGTACCAGCCCTTCAGTCAAACCGTTCCACACCACCCAAGCCAAGCGCTCTCTCCTGGCAGGCTGCAATTGATGCTGCTAGGCAGGCCAAGGCGTCACACACCATGAGCACCAACACCACCGCACCTGTCGGATCGCTATCCCAAAGAAAACGGCAGCAATATGCCAAAAGCAAGAAACAGGGCGGATCTGCGAACAGCAGGCCGCCCCGCGCCCTGTTCTGTCTGACTCTCAACAACCCCATCAGGAGAGCGTGCATTAGCCTAGTAGAATGGAAGCCATTTGATATCTTTATATTAATCTCTATTTTTGCCAACTGTGTGGCCTTAGCTGTTTACATTCCTTTCCCCGAAGATGACTCCAATTCAACTAACCATGATCTG

Function

NR:

description
PREDICTED: voltage-dependent L-type calcium channel subunit alpha-1D-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017246 True 513 mRNA 0.52 3 51723699 51725528

Neighbor

gene id symbol gene type direction distance location
AMCG00017237 NA coding upstream 59858 51653530 ~ 51663841 (+)
AMCG00017238 NA coding upstream 74181 51647404 ~ 51649518 (+)
AMCG00017243 NA coding upstream 83084 51639637 ~ 51640615 (+)
AMCG00017230 NA coding upstream 509183 51214259 ~ 51214516 (+)
AMCG00017231 NA coding upstream 511308 51212179 ~ 51212391 (+)
AMCG00017248 LOC107743249,LOC106566685 coding downstream 32197 51757725 ~ 51827775 (+)
AMCG00017247 NA coding downstream 113055 51838583 ~ 51844854 (+)
AMCG00017252 cacna2d3,LOC103362818 coding downstream 222689 51948217 ~ 51985368 (+)
AMCG00017253 cacna2d3,LOC103362818 coding downstream 279692 52005220 ~ 52015155 (+)
AMCG00017267 NA coding downstream 658492 52384020 ~ 52413911 (+)
G19366 NA non-coding upstream 151705 51565289 ~ 51571994 (+)
G19292 NA non-coding upstream 383582 51339913 ~ 51340117 (+)
G19275 NA non-coding upstream 426981 51295832 ~ 51296718 (+)
G19245 NA non-coding upstream 584864 51137293 ~ 51138835 (+)
G19195 NA non-coding upstream 995548 50727740 ~ 50728151 (+)
G19465 NA non-coding downstream 381420 52106948 ~ 52116341 (+)
G19515 NA non-coding downstream 822221 52547749 ~ 52548031 (+)
G19588 NA non-coding downstream 1071404 52796932 ~ 52802211 (+)
G19591 NA non-coding downstream 1125403 52850931 ~ 52854722 (+)
G19617 NA non-coding downstream 1132625 52858153 ~ 52863723 (+)
G19114 raf1,LOC108276324 other upstream 1160421 50559450 ~ 50563278 (+)
G19113 NA other upstream 1170714 50551880 ~ 50552985 (+)
AMCG00017183 NA other upstream 1996132 49713467 ~ 49727567 (+)
AMCG00017173 NA other upstream 2319854 49402531 ~ 49403845 (+)
AMCG00017167 NA other upstream 2341481 49372022 ~ 49382218 (+)
AMCG00017280 NA other downstream 1088725 52814253 ~ 52817369 (+)
AMCG00017287 NA other downstream 1095533 52821061 ~ 52834042 (+)
G19683 NA other downstream 1610381 53335909 ~ 53339655 (+)
G19754 NA other downstream 1777904 53503432 ~ 53536464 (+)
G19829 NA other downstream 2065019 53790547 ~ 53792694 (+)

Expression


Co-expression Network