AMCG00017289 (acy1,LOC105933287)


Basic Information

Item Value
gene id AMCG00017289
gene name acy1,LOC105933287
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 52936900 ~ 52951955 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017289
TAGAAAGCTCAGGCTAGTGGttctgttgcatttattttaaaatgcaattaacttaagatgtttatgtatatatgttcgATCTATCCGTCTATCTAGCTGCCTATAGTCTTAGGTATAGTATATCAGTATATATAAGACTTTGTTTTTACAATGCCAGTATCTGCTTGATGAGTTTGACCCAGGGCTGTTTTGTGGTAGAATAATTGCAGGTCCCTCTCTCCCAGACAGGACAGGACGCCATGCTGCCAGACAAAGACAGGCCAGGTGCGCAGGTGGGCGGCGGAGGGGGCCGCGAGTCCTCGGAGGACCCGTCTGTGTCACTCTTCAGGGAATACCTGAGAATCAGGACCGTCCACCCGGAGCCCAATTATGAGGCAGCTCTGCAGTTCCTGGATCGGATTGCGTTGGAGCTGGGGCTGCCCATGAAGAGAGTGGAGGTGCACCCCGGCAGAGTGGTGGCCATCATGACGTGGGAGGGAACCGAGCCGAAGCTGAAGTCTGTGCTGCTGAACTCCCACACTGACGTGGTGCCGGTCTTCCAGGTCAGGAGGTCTTCCCCATACATCGAGGCGATCAGGAGGCTGAAGTCCAGAGGAACGAGACTCGGCCGCACCATGCACCTGATGTTCGTTCCAGATGAGGAGGTCGGAGGTCATAAAGGAATGGAGACCTTCATCACCCATCCTGAGTTTCAGAAGCTGAACATCGGCTTCGCGCTGGACGAAGGTCTAGCAAACCCGACGGAAGCCTTCACGGTGTTTTATGGCGAGAGGAATCCGTGGTGTGAGTATCCGGTCGGTTCATGTTTCGCTTGTATCAAGTCCCGAAGAACAGGCTTCCCGACGTGGCAGCAGAGTTTCAGTGTGCCCAATGGTAGCATCCAGGGAGGGGATTGTGGCGGCAGATGGAGAGCCCGTGAGATCCGGGGGGATGTGCGGCAGTCTGGGATACGCCGTGCTTTCCAGCATGGGAATAAGACGCTGCTCTCCTGACGCTGCTGGGGAGCAACCCTACAGACTCGTTGTTTCGTCCTTGAACCAGCTGCTGACAGTGATATCACCTGATCTGGTTATTTGCTTTGCCGTAGATTCGTAcacaggtttttaaaatgtaaccgtttcatttcacctttatttaaccagatgcaaaaagcaataaacacacaatacctctacactttaaacaaacacaacacactgtatacaaagcaaatacatcagtgcacaatataaaaacaatggagATAAACAATGATCAGAAATGGAACCGGTACAGGTGCTGGAATTCCCCTCGTATTATTATTGCTAGGGGTGTGgctggggtcagaggtcagccCCGGACAGGAAGGGCTTCCGCTAGGGTCAGGGGTCACTTCAGCGCGGCACTTACTGCCCTCGTGTCCGCGGTTCAATCTGGAATAGGGAAAGATTTCTGTAGGATACAGCATTTTAGGCACAAATCCTGCGGCGGTGTCGCTGGCGTTTGGCCGCGGGTGGAGGGTGATGCTGCCTGCTGTTCATTTCCAGGGATCACAGTGAAATGCACAGGGAGTCCCGGCCACGGGTCCCGCTTCGTTGAAAACACAGCCGCTGAAAAAATGcgTAAAATTATCAATTTATTCCTGGACttcagagagaaggagaaaacaCGGCTGGACACCAGCGAATGCTTCACACTGGGCGATGTCACCACCATCAATATGACCATGGTGCAGGGGGGCGTGGCCTACAATGTCATCCCCCCGGAGATGGACGTGAGCTTCGACCTTCGCATCCCCCCCACAGTGGACCTGCAGGAGTTTGAGGCGCAGATCAAGGAGTGGTGTGCGGCTGCTGGTGACGGTGTCACCTATGAGTTTGCACAGAAACACATGAACCAGAGCATGACGTCGACCGCGGAGAGCAACCCCTGGTGGAGGGCCTTCAGCTCTGCCTGCGGCACCATGAATATGACTTTGAAGAAGGAAATCTTCCCAGCTGCCACAGACAGCCGCTTCATTAGAGCGGTGGGCATCCCAGCCATCGGCTTCTCCCCGATGAACCGCACCCCCATCCTGCTGCACGACCACAACGAGTTCCTGAACGAGCGTGTCTTCCTGCACGGCATCGACATCTACCAGTGCCTGCTGCCCGCCCTGGCCAGTGTGCCGGCCCTGCCCGAGGAAGCCTAGGCACTCCTCTGcacagcactctctctctctcatgcacaAATACATGATCTCAGGACTTtgtcttaaaaagaaaacctctctctctcttcattcaTTTGCCTCCTTTACAccactcactcactctttcATTTCACTCTTTCCTtatccctttccctctctctctctctctcacccacactatttctctctctctccctctctctcacacactcacgcCCGTACGTGCCCTGACTGGCCGCCTGTCCTCCCGCGGTACGATGGCACCACCATAGTGGGGCTCGTCTGAGTGGACAGTTACACCGCCGATCTATCGAGCACAAAGAGTCTTCCCTCTTGGCAGTGCCGGCGCCGAATGGAGACGTGTGTAATTGGTCATTCAGGGCAGGGAAGAGGCGCTTCCAGTGGCAATCTCATCATCTTATACTGACCCCAGTCACCCCCCTCAGCCACAGCACTGAGACTGTCTGCCTTATAATTTCAGATGAGTGAGATTTTTTGTAACTCGCATTAGAATttattagaattagaatttgcactttgtattgcgctcaTGTTGTAAGtcaacctggataagggcgtctgccaaga

Function

symbol description
acy1 Predicted to enable aminoacylase activity. Predicted to act upstream of or within cellular amino acid metabolic process. Predicted to be located in cytoplasm. Is expressed in lens; liver; peripheral olfactory organ; pronephric duct; and pronephros. Orthologous to human ACY1 (aminoacylase 1).

NR:

description
aminoacylase-1A

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0006520 cellular amino acid metabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0008237 metallopeptidase activity molecular_function
GO:0004046 aminoacylase activity molecular_function

KEGG:

id description
K14677 ACY1; aminoacylase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017289 True 2758 mRNA 0.53 12 52936900 52951955

Neighbor

gene id symbol gene type direction distance location
AMCG00017290 NA coding upstream 3212 52930490 ~ 52933688 (+)
AMCG00017288 NA coding upstream 14503 52918052 ~ 52922397 (+)
AMCG00017279 NA coding upstream 176396 52757463 ~ 52760504 (+)
AMCG00017275 NA coding upstream 193009 52741163 ~ 52743891 (+)
AMCG00017267 NA coding upstream 522989 52384020 ~ 52413911 (+)
AMCG00017297 cacna2d2,LOC107666002,LOC102776731 coding downstream 302712 53254667 ~ 53275017 (+)
AMCG00017301 NA coding downstream 334474 53286429 ~ 53302089 (+)
AMCG00017300 NA coding downstream 404626 53356581 ~ 53363297 (+)
AMCG00017303 NA coding downstream 422929 53374884 ~ 53380042 (+)
AMCG00017307 NA coding downstream 428940 53380895 ~ 53387713 (+)
G19641 NA non-coding upstream 1497 52933764 ~ 52935403 (+)
G19617 NA non-coding upstream 73177 52858153 ~ 52863723 (+)
G19591 NA non-coding upstream 82178 52850931 ~ 52854722 (+)
G19588 NA non-coding upstream 134689 52796932 ~ 52802211 (+)
G19515 NA non-coding upstream 388869 52547749 ~ 52548031 (+)
G19660 NA non-coding downstream 55205 53007160 ~ 53007531 (+)
G19664 NA non-coding downstream 72670 53024625 ~ 53024934 (+)
G19675 NA non-coding downstream 287151 53239106 ~ 53283206 (+)
G19674 NA non-coding downstream 324926 53276881 ~ 53320938 (+)
G19679 NA non-coding downstream 354140 53306095 ~ 53335384 (+)
AMCG00017287 NA other upstream 102858 52821061 ~ 52834042 (+)
AMCG00017280 NA other upstream 119531 52814253 ~ 52817369 (+)
G19114 raf1,LOC108276324 other upstream 2373622 50559450 ~ 50563278 (+)
G19113 NA other upstream 2383915 50551880 ~ 50552985 (+)
AMCG00017183 NA other upstream 3209333 49713467 ~ 49727567 (+)
G19683 NA other downstream 383954 53335909 ~ 53339655 (+)
G19754 NA other downstream 551477 53503432 ~ 53536464 (+)
G19829 NA other downstream 838592 53790547 ~ 53792694 (+)
AMCG00017325 nckipsd other downstream 842671 53794626 ~ 53805796 (+)
G19854 NA other downstream 901952 53853907 ~ 53855839 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
mexican tetra (Astyanax mexicanus) G191118 acy1,LOC107575257,LOC107747934,LOC107752189 non-coding NC_035918.1 CM008321.1 18855284 ~ 18861232 (+)