AMCG00017295


Basic Information

Item Value
gene id AMCG00017295
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 52868327 ~ 52881013 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017295
CAATCAGGCGGCGCTCTGGGCGGCTGTGTACTTTCCAAAGCTAACGGCCGGGAGGAGCGCTGGGAGCCGGGCGGCGGCGAGGCAGAGACGCGGCGGACGGACCTCAGCTCGAGTTACAGTCCAGTTAGAGCCACCGAGCGCACCGAGGTCCCGGCTGCGAGGCGAGGCGGGCACAGAGCAGCGATGAGCGGCGGCGAGGAGCACGGCGCGGCCCACAACTCCTTTGAGATGACCTGGGGCAGCACGACCAGCAGCGGCTACTGCAGCCAGGAGGACTCGGACCCGGAGCTGGAGCAGTACTTCACGGCCCGCACGTCCTTCATCCGCAAGCCCCGGCCAGACAAGGGGCCGAGCCGCACCGGGCTGCTGGGAGCTGGGAGTGGGCTGGGCATTGAGGGGTACAGCTCGGGGCCTGAGAAGGGTCATGTACAGAAGTCACCTCCCAGGACTGCCTTGCGTGTCCACAGGGACGCAGATGACCAGATCGAGTGGGGAAAGCAGGAACTGTCCCCAAGCGAGATCGAGCAGAAGGTGAAGGAGTACAACGCACAGATCGACAGCAACCTCTTCATGGCGCTGAATAAAGATGGGTCATACACTGGCTTCATCAAGGTGCAGTTCAAGCTGGTGCGGCCTGTGTCGGTGCCTCCGGCCCGCaaggcggcggcggcggcgggaCAGGATGGGCGCAGGACAGTGGGGGTGAAACGCCGCACCTCCTTCTACCTGCCCAAGGACACGGCCAAGCACCTGCACATCAGCTCTCGCACCAAGGCGCGGGAGGTCATCGAGGCACTGCTCAAGAAGTTCACGGTGGTCGACAACCCGCGCAAATTCGCCCTCTTTGAGCGCATCGAGCGCCACGACCAGGtGTACCTGCGCAAGCTGTCGGACGAGGAGCGGCCCCTGCAGCTGCGCCTGTGCGCCGGGCCATGCGAGAAGGCCCTCAGCCTGGTCCTGAAGGAGAACGAGACCGGCGAGGTCAATTGGGACGCCTTCACGATGCCCGAGCTGCAAAACTTCCTCCGCATCCTGCAGCGTGAGGAGGAGGAGCACGTGAAGCAGATCGTGCAGCGCTACGCTCGCGCCCGCGACAAGATGAGGGAGGCCCTGGCCAGCAGCACCCCGGGCTGAGAGGGTGGCCGTGCCGCTGCAATGCTGCCTGAGGGCCTCCAGAGGGCCACGCCTTCCTTCCAAAGATCCCAGCTGAACTTGCATGCGGAACGGACACAATGCTGCCCCGTGTGGGTGGtggtcctgagagagagagagagagagagagagagagagagagagcgcgcgAGTGGAATTAAACCGTGATGTGCCTTTGAGAACCACCCTGAGAGAGTGCGAATGAGTTGTTTGTGAGAGAGCGAAAGAGAAACCGAGTCAGACATGCTGTGCCTGGGTATGCTGGCCTTAATTGACTCCTTGTGTGTTTCCAGTGCGTTGTTGAATGGCCGCTTAGGCCGAGGCGCTGGGGGTTGTTTGCAGCGGCTGGTTGAGTCTGCGGTGCTGACAGGCTGCTCCTGAGCGTGCGATGAGTGACGGAGTGGATGTGAAGTCTGAGCGGCGCACCATGTGCGTGTGGAGCAGCACTGGACCAGAGGATCCTGACACCGCAGCCCTCCAGAGCCAGTGCTTTGCTTCAGCGTGCATGTTCAGTAGCCCGTGTTTTCTCTGTGTAATGTGGGGTACTTTTGAGATTTTTTCTGTCTTgtctttttatgtgtttttgtttcctttggtgATGTTGGTGGGTGTCGTTCCCCTCATTTTTCAAATCGGTGACGAATTGTTCCAGTTTTGTAAATGTGACATCACATGTACACAGGaattggtttggtttgttgGATTGTTTCCACTTTTCTCCTTCCATTTCCTTCCAGTGGCAAATTGATCTATACTTGCCACTTGTATTCAGTCATACACACAGCTGGAccctctgtgtctcagtctgCACAGTAACTCAGATGTGTTACACACCCttgtaattgaaattaaagtaaactACTTCTAGCcaaaatgcacaataaataattttatcAGGAAAAGTCTGTTTTAGTCATTAACTTGTGTTGGGTTGATGGGAAATCGTCCTCCCATATTCCAATGAGCGATGAGAAATGGGAGTGTGGCCCTGTGTGTTCAGCGG

Function

GO: NA

KEGG:

id description
K09850 RASSF1; Ras association domain-containing protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017295 True 2155 mRNA 0.58 7 52868327 52881013

Neighbor

gene id symbol gene type direction distance location
AMCG00017281 NA coding downstream 14745 52844864 ~ 52853582 (-)
AMCG00017285 NA coding downstream 27683 52838503 ~ 52840644 (-)
AMCG00017282 NA coding downstream 47210 52818039 ~ 52821117 (-)
AMCG00017286 NA coding downstream 53482 52811847 ~ 52814845 (-)
AMCG00017283 LOC105025252,LOC106572261,LOC106566794,LOC100710477,LOC108425062,LOC101076147,LOC103027457,LOC104949002 coding downstream 61896 52803720 ~ 52806431 (-)
AMCG00017296 NA coding upstream 3462 52884475 ~ 52900125 (-)
AMCG00017294 NA coding upstream 23327 52904340 ~ 52912643 (-)
AMCG00017293 nprl2 coding upstream 31810 52912823 ~ 52917944 (-)
AMCG00017291 tmem115 coding upstream 43810 52924823 ~ 52929839 (-)
AMCG00017298 NA coding upstream 401452 53282465 ~ 53286478 (-)
G19604 NA non-coding downstream 98912 52768902 ~ 52769415 (-)
G19551 NA non-coding downstream 177141 52679953 ~ 52691186 (-)
G19548 NA non-coding downstream 203145 52649008 ~ 52665182 (-)
G19516 NA non-coding downstream 320277 52547737 ~ 52548050 (-)
G19330 NA non-coding downstream 1430234 51437880 ~ 51438093 (-)
G19663 NA non-coding upstream 128865 53009878 ~ 53010218 (-)
G19687 NA non-coding upstream 357193 53238206 ~ 53238409 (-)
G19741 NA non-coding upstream 537172 53418185 ~ 53419077 (-)
G19873 NA non-coding upstream 972970 53853983 ~ 53854628 (-)
G19875 NA non-coding upstream 983897 53864910 ~ 53868777 (-)
AMCG00017292 tusc2,LOC108433681,LOC104930950 other downstream 1892 52858340 ~ 52866435 (-)
AMCG00017251 actr8 other downstream 1008060 51846596 ~ 51860267 (-)
G19335 NA other downstream 1418541 51445587 ~ 51449786 (-)
AMCG00017234 LOC100690894,LOC102799047,LOC102206238 other downstream 1433088 51430687 ~ 51435239 (-)
AMCG00017232 NA other downstream 1655954 51184231 ~ 51212373 (-)
AMCG00017299 NA other upstream 313820 53194833 ~ 53215336 (-)
G19730 NA other upstream 502327 53383340 ~ 53387709 (-)
AMCG00017313 NA other upstream 571105 53452118 ~ 53531131 (-)
G19808 NA other upstream 795070 53676083 ~ 53728883 (-)
G19824 NA other upstream 881985 53762998 ~ 53764376 (-)

Expression


Co-expression Network