AMCG00017324


Basic Information

Item Value
gene id AMCG00017324
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 53876586 ~ 53883504 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017324
catttagagatatctctaaatgataatttggcttgccatactggTGCAGTTCAGCACTCTCTCCGCAAGGTGGCAGCACCGCCGAGCGTCTCCTCATCCCCGGCGTGTGTCACAGAAAGGCCGTCCCTCCCGCCCCTCTTCCCCGTCGCGCTGCAGTTCCGGGCGAGGCATGGCGGTAGCGGGCTGTGCACGGGTGCTGTGCCGCGGAGCAGTGCAGGGTTTGCGGCTGGGACCGGCGGCGTCGCCCGCTTTCATCAGCAGCCCCCCGCAGTGCCGCTCGCACCGCCTGACCCCCGGCGATGATGAGATGTACCAGCGGACCACCGTGTCGGTGATGCAGAAGGAGGGGGGGATAGAGATCCTGGTTCTGGGCACGGGCGCGCGGGTCGAGAGGGTGGACCCGGTGGTTCTGAGGTTCATGAGGAAGAAGGGGATCGCGGTGGAGGTGCAGGACACGCCCAATGCCTGCGCAACCTTTAACATCCTGTCCACTGAGCGGCGAGTGGTGGCAGCCGGCCTGATCCCGCCCCCCAGCGCTGGGTGGGACGCAGAGTAGCAGCAATTGGCTGATCGTGATGCTCACCCCTGCTGCGATTGGCCGATTGTGTCACTCACCCGAGCTGCAGACTGTCAGTACCGAACTGtagggggtgggagggggatAGACCCTACCTCCCTGAATCCAGAAACCAAGGGGCAGAGGTCCATTCTCCTGGGGTCGTCTCTCAGGACTCCAGCGCAGCGGTCAGTGGGGCCCTGTGAGGCCCCTGTCCCGCGCTCTGGACACTGTACTGTACGGTGTGCAATTAAAgactttgtgtttctgtacGGGTCTTGGTCTGGCTTGACaacaacagtgtgtgtgtgtttcatgtcTTGCTGCAGTTGTGGTAGTAATAAG

Function

GO: NA

KEGG:

id description
K09008 NDUFAF3; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017324 True 901 mRNA 0.62 5 53876586 53883504

Neighbor

gene id symbol gene type direction distance location
AMCG00017326 celsr3,LOC106566780 coding upstream 41679 53830871 ~ 53834907 (+)
AMCG00017330 celsr3,LOC107591847,LOC107679402 coding upstream 55113 53817272 ~ 53821473 (+)
AMCG00017323 NA coding upstream 141611 53722534 ~ 53734975 (+)
AMCG00017319 LOC106566567,LOC105013928,LOC102296397,LOC101473935,LOC102778284,LOC103370863 coding upstream 186680 53674878 ~ 53689906 (+)
AMCG00017314 NA coding upstream 206814 53659498 ~ 53669772 (+)
AMCG00017335 LOC108435819,LOC108440644,LOC107712078,LOC107721176 coding downstream 130057 54013561 ~ 54033037 (+)
AMCG00017336 NA coding downstream 153010 54036514 ~ 54056665 (+)
AMCG00017340 NA coding downstream 270103 54153607 ~ 54170510 (+)
AMCG00017347 NA coding downstream 321628 54205132 ~ 54208721 (+)
AMCG00017349 rab7a,rab7,LOC108254780,LOC106518505,LOC105017315,LOC107093905 coding downstream 441832 54325336 ~ 54335011 (+)
G19838 NA non-coding upstream 60510 53815845 ~ 53816076 (+)
G19836 NA non-coding upstream 62599 53813785 ~ 53813987 (+)
G19789 NA non-coding upstream 202772 53671984 ~ 53673814 (+)
G19751 NA non-coding upstream 342712 53452130 ~ 53533874 (+)
G19729 NA non-coding upstream 467286 53408965 ~ 53409300 (+)
G19889 NA non-coding downstream 29314 53912818 ~ 53914877 (+)
G19899 NA non-coding downstream 65254 53948758 ~ 54041033 (+)
G19887 NA non-coding downstream 75959 53959463 ~ 53961838 (+)
G19958 NA non-coding downstream 173356 54056860 ~ 54057920 (+)
G20006 NA non-coding downstream 287711 54171215 ~ 54171423 (+)
G19860 NA other upstream 11868 53864108 ~ 53864718 (+)
G19854 NA other upstream 20747 53853907 ~ 53855839 (+)
AMCG00017325 nckipsd other upstream 70790 53794626 ~ 53805796 (+)
G19829 NA other upstream 83892 53790547 ~ 53792694 (+)
G19754 NA other upstream 340122 53503432 ~ 53536464 (+)
AMCG00017331 NA other downstream 31621 53915125 ~ 53936482 (+)
G19896 NA other downstream 56033 53939537 ~ 53947618 (+)
G19956 NA other downstream 171296 54054800 ~ 54055175 (+)
G19961 NA other downstream 180854 54064358 ~ 54066187 (+)
G20013 NA other downstream 424291 54307795 ~ 54392591 (+)

Expression


Co-expression Network