AMCG00017336


Basic Information

Item Value
gene id AMCG00017336
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54036514 ~ 54056665 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017336
ATGTATAATGATAccggGGTGTCTCTGCCCAGCACGCCCGTGTGTGGGGCGGTGTTCTGCACAGCTCCCCCTCAGCGGCGCCGGTACCTGGTCACCCCCCTGGCATTGCCGTTCGTCTGTCCGGCCACGCACCACAACAACCAGCAGAGGACGCTGGTGATGCAGCAGAAGGAGTACTGCAGgttTCACCAGGGCTGGCAGCGACCATTTTATGGCTCCCGTGCAGAGAAAGAGGAGTACAGGAAGGAAGTGCGGGAGCTGCTGAAGAGGCAGATGTTGGAGAAGTGGGAGGAGCAGAGACACAGACTGGCCAATCGGGTGCAAGAGGCGGAGCCGATGTTTGAAGCGGACCGCCTGGCTCTGAGCCGCGAGATGGAGCAGAACCGGAGCCGAGCCCGGGCGCTCAGCCACTACAGGGACGAGAACAAGAGGGACCCCGCCCTTTTCCAGACCCAGTGTCCATATGCGTCCCCCTGCCCTCCATGTCTCCCCGACTCTCACCCCACATCTGCCTCCACTCCCTTACCTGACCTGTGTCCCTCTTCCATGGCGCGGAGGGACCCGGGGCCACAGGGGCCCAGAAGAGCAGCAGCACACAGAGCGTGGCACACAGCATGGCCGTATGGAGCTCTTCCAGCTGATGGAGGTGTGTGTCGGCCACAGGAGaatctgagggagagagagctgctGCATTACAACCCCACTCTCAAATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017336 True 714 mRNA 0.62 8 54036514 54056665

Neighbor

gene id symbol gene type direction distance location
AMCG00017335 LOC108435819,LOC108440644,LOC107712078,LOC107721176 coding upstream 3477 54013561 ~ 54033037 (+)
AMCG00017324 NA coding upstream 153010 53876586 ~ 53883504 (+)
AMCG00017326 celsr3,LOC106566780 coding upstream 201607 53830871 ~ 53834907 (+)
AMCG00017330 celsr3,LOC107591847,LOC107679402 coding upstream 215041 53817272 ~ 53821473 (+)
AMCG00017323 NA coding upstream 301539 53722534 ~ 53734975 (+)
AMCG00017340 NA coding downstream 96942 54153607 ~ 54170510 (+)
AMCG00017347 NA coding downstream 148467 54205132 ~ 54208721 (+)
AMCG00017349 rab7a,rab7,LOC108254780,LOC106518505,LOC105017315,LOC107093905 coding downstream 268671 54325336 ~ 54335011 (+)
AMCG00017354 NA coding downstream 279275 54335940 ~ 54343047 (+)
AMCG00017350 ARPC4,arpc4,LOC103385929,LOC107094019,LOC107753787 coding downstream 296041 54352706 ~ 54357989 (+)
G19887 NA non-coding upstream 74676 53959463 ~ 53961838 (+)
G19889 NA non-coding upstream 121637 53912818 ~ 53914877 (+)
G19838 NA non-coding upstream 220438 53815845 ~ 53816076 (+)
G19836 NA non-coding upstream 222527 53813785 ~ 53813987 (+)
G19789 NA non-coding upstream 362700 53671984 ~ 53673814 (+)
G19958 NA non-coding downstream 195 54056860 ~ 54057920 (+)
G20006 NA non-coding downstream 114550 54171215 ~ 54171423 (+)
G20028 NA non-coding downstream 286737 54343402 ~ 54345777 (+)
G20086 NA non-coding downstream 495475 54552140 ~ 54555325 (+)
G20136 NA non-coding downstream 558576 54615241 ~ 54615448 (+)
G19896 NA other upstream 88896 53939537 ~ 53947618 (+)
AMCG00017331 NA other upstream 100032 53915125 ~ 53936482 (+)
G19860 NA other upstream 171796 53864108 ~ 53864718 (+)
G19854 NA other upstream 180675 53853907 ~ 53855839 (+)
AMCG00017325 nckipsd other upstream 230718 53794626 ~ 53805796 (+)
G19961 NA other downstream 7693 54064358 ~ 54066187 (+)
G20013 NA other downstream 251130 54307795 ~ 54392591 (+)
AMCG00017357 NA other downstream 366888 54423553 ~ 54452054 (+)
G20099 NA other downstream 471087 54527752 ~ 54529204 (+)
G20085 NA other downstream 516809 54573474 ~ 54582399 (+)

Expression


Co-expression Network