G10529


Basic Information

Item Value
gene id G10529
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 3280490 ~ 3281193 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU13074
agtgcccttcgcagggtagccacagagcgctttacagactggtaaacatacaacaaacatatagcaaaataaaaaacataaatacaataaaatcaaatatagacctgtaaacattttacatgatctagaataaagtgagtgaacatttaagtaaataaaccatttaggcacggaggagagaaaaacaaaaaactcctatggatggcatgtaggagaaaatgaatctctgggggtccacggcttagggcctaggcctaatggttgcctcccctccaggcagtatagttattacagcagcaaggagatcagaaagttctttatcggtgctgctggctgtgctcttccctctggaggaggcctctcgctggccattgggggtggagggtttggaccatcaacaggctttgggttgcgatggctcgtcaaaACCTTGGGTATGGATGCCCTgttgaccctccgtggtgaggtgcttctgggatgggttgtgcctcatcagacttccatggtgggggacgaggtgcctcgttggaccctcagaggaggctgttgctggaagacaagagggcagtcgtgctcagatactggtcatgcagtgcaggacatttccaaagacagttgtgcaattgcatgtccatggcacaccggcggcactatgggctagaaaaacagagactaaacagatgagtcttcagacgtgatttaaa

Function

GO:

id name namespace
GO:0006518 peptide metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13074 True 704 lncRNA 0.61 1 3280490 3281193

Neighbor

gene id symbol gene type direction distance location
AMCG00016028 timm10b coding downstream 564638 2714969 ~ 2715852 (-)
AMCG00016027 NA coding downstream 608781 2606708 ~ 2671709 (-)
AMCG00016026 NA coding downstream 680013 2596014 ~ 2600477 (-)
AMCG00016022 NA coding downstream 753213 2519543 ~ 2527277 (-)
AMCG00016023 NA coding downstream 765410 2463071 ~ 2515080 (-)
AMCG00016041 NA coding upstream 182473 3463666 ~ 3475993 (-)
AMCG00016042 NA coding upstream 216509 3497702 ~ 3502851 (-)
AMCG00016047 NA coding upstream 341725 3622918 ~ 3668558 (-)
AMCG00016045 NA coding upstream 502341 3783534 ~ 3784496 (-)
AMCG00016050 NA coding upstream 542058 3823251 ~ 3835355 (-)
G10486 NA non-coding downstream 194953 3085303 ~ 3085537 (-)
G10483 NA non-coding downstream 232621 3040371 ~ 3047869 (-)
G10474 NA non-coding downstream 302282 2977997 ~ 2978208 (-)
G10464 NA non-coding downstream 316862 2873224 ~ 2963628 (-)
G10440 NA non-coding downstream 513033 2765494 ~ 2767457 (-)
G10548 NA non-coding upstream 90348 3371541 ~ 3371898 (-)
G10556 NA non-coding upstream 97185 3378378 ~ 3378585 (-)
G10592 NA non-coding upstream 209565 3490758 ~ 3547091 (-)
G10596 NA non-coding upstream 233246 3514439 ~ 3522035 (-)
G10624 NA non-coding upstream 460400 3741593 ~ 3742262 (-)
G10478 NA other downstream 245307 3034422 ~ 3035183 (-)
AMCG00016029 NA other downstream 434133 2784125 ~ 2846357 (-)
G10420 LOC101154678 other downstream 569805 2710399 ~ 2710685 (-)
AMCG00016024 ilk,LOC106581335 other downstream 725544 2532617 ~ 2554946 (-)
AMCG00016046 NA other upstream 247649 3528842 ~ 3542536 (-)
AMCG00016049 NA other upstream 605105 3886298 ~ 3920503 (-)
AMCG00016074 NA other upstream 1622663 4903856 ~ 4929900 (-)
AMCG00016110 ufm1,LOC107701138 other upstream 4399718 7680911 ~ 7753437 (-)
AMCG00016119 NA other upstream 4838028 8119221 ~ 8124033 (-)

Expression


Co-expression Network