G10715


Basic Information

Item Value
gene id G10715
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 4166778 ~ 4170338 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU13286
gacttactaatttattcgagttttttgaacatacaattgcagctgtagatcacatgaaagcatatgatatgatatacttagattttcaaaaagcttatGATAAGGTTCACCACACCAAAGAtcgatcctcaaattggaagctgtaggtattcagggtaatgtaagtagatggattatgaactggttgatgtataggaaacggagggtgtcgattagaggagttgattctaactggagtgaggttgtcagtggagttccacagggatcagtattagggtctgtgcattttctaatctatattaatgatctggactctgggatagttagcaaacttgtcaaatttgcagacgATACTGAAATAGGTGGCTAAGCacatacaatctcggcagctcaggttattcaaagggacttggataatattcagttgtgggccgacacctggcagaaattcaatgtggacaagtgcaaggtattacatgcaggtaataaaaatgtccacaataattacactatgggaggaatagaactagatgaagtaacgcatgagaaagatctaggggtctacgtggactcctaactttctccatccaaacaatgtggggaagcaataaaaacagcaaacaaaatggtagggtatattgtcaaaagtgtagaatttaaaacaagggcagtaatgttaagactgtacaatgcactagttaaacctcatctggaatattgtgtacagttctgggctccacacttcaagaaggatatcgctgctctagaggcagttcagagtagagcaaccagacttattctaGGTCTGacgggaatgtcctactgagagactgagggaactgaaccttttcgtccctggaacagagaagactatgtggggacttgattcaagtcttaaaaatcatgaaaggcattgatcacatcaaaccagaggagcttttccagatctgcaaatggaaattgggcttcacgacattcaagacagaaaacagaagacccttcttcacacagagagttggaacctggaacaaactccccagtgatgtggctgaatatgaaaatttgggaacattcaaaaatagactggataggatccttggatcacttagtaattaatggacaccaaacaagcatgatggggcgaatggtcccctcttgtttgtaaactttcttatgttcttatttaaaatTTGCCTTCCAAAGGAAATTCACATATTATTTGaaacaacaaattatatatatatatataacaaaaggTAATGAACTGTTTTACCTTGCATAGTAACCAACTTTAATAGAGCTTCTAGATGTTCTTTCTCAGAAGCAGTGGCTTGATGTAACCAGGCCAGCATATCTCCAACATACCTGGAAGAGCAGAACAACTTATGCTGGCAAATCAGTAACTGTTATTACCGCAGATAGATAAAGCCTGGGGTCAAGTACAAATAAATGCACTTGAGTACAAGTATGTACTTTGTTGAAGGCTGAGTACAAGCACAGGTACGAGTATGTGTTTTAATCAATGTACTCAAGTACAATTTACAATTGCTTTCAACACCACTTGTTTATTCTTCCCCCTGACCAATGAATAAGACATTCTGCTATCATACCACATATTGACAaacccaaaccaTATTTGGATCAATGTTAtctgtgataaataaatactgtcaattcaattatgtatatttattacaaagtgCTTATGTCATTTTTCAGATGCGTTTCTGCTATTCGGTTATTAAAGAACACATcacattatttggtaagttgtAGGCTACATTTGTAAAGGTTAGAAGTTGCTAATATGATAGAAACAAACTGGAAAAGTGTTCTAtgtcttacttatacactatatgtaaacatacataaaaccataattttaggatCCCCACTAGTTCCCCTTCAAGATCGAGTGTAAAGTTTTGACCTACTCCACAGAAATCAACAGgacaatacataaaaatgattaGTGTACATAACACATCTGGGCTCAAGTACTGACTGCCTTTCACTGGAGTAAAGGAGTGGAATGTATCCTCTTTAAATTTGGCAGATTAATACCAGATACTAGGTATGAAAAAGTAGAgagtggaataaaaataaaaagtggagAGTATTTTAGAAAACATCAAAAGCATAGACTCCTATGCTGAAAAGTCAACCCATCCTCAAAGGCCAGCCCTTATGCCTTGCAATGTAATgataaagtgaaattaaatatatgcaaaacTGTTTCTCTGTACTTGGGGTGGTACTTCGTAAACACGTAGCATAGCACACTGTACTTGTCCATATTCTTCTGCTGATGGCCAGAAAAACAATTGTGCAGACTTAAATTCACACTTGCTGAAAGCTCACGTGTGACGGGGCAGACAGTCAGGAGGAGGTGAGCTTCATTTCAGGGAGCTGTCGATATCTCAGCCACTTCTTAGGCAACTAATGTTCTAATAGGAGAAACATTCCTAGAAAAGCAGTAATTGGGAACATGCTTTAATTCCTGTAACTGAGGAAAAGGCACATTGTGCTCATTTAAATGGGAGCAACCACCTCTGCAGTTCCCACAGTCAAGTGGACAACTTCAGGCtaggttttttttattattatttttattgaagccAAGCTTAATAAGAGttatcagaaaacaaataacaaagcaGGAGAAAACTTGAGTATGTCATGAAACTGGTTGTGCACGTTAAGCAGTCATGGCTCACAGAGACAGAGCTAGCTGCCCCTGGAGCTGTTAAAAGAGTTGATCTCCTTTCAGTTAGTATAGTGATGAGGTAGGGGCTGTAAGCAGTGCTATAATGTGCTATGCTATCAACTCCCAACTTTGGGCATATTGTACATTtgccaaattaataattatgtcACATCACCTTAAAGTTATATTGAAATAACTGTCTGTATATGTCTGTATCTAAATTGCCctctctgtgtatgtatgtatgtatgtatgtgtgtgtgttgcccagcgatggactggcgtcccgtcctgggtagtattcctgccttgcgccctatccctgccgggatcggctccggcttccccgcgaccctcaccaggataagcggtttcgaaaatggatggaagGATGGATGCGCCTCTGTACCTAAGGCAGCATGGGAATCAAAATCCAGGAACTCCTGCTGAATACCTAAAGTGGATTCTGAATGATGGTCATAttaagatttttcttttgattctttcaaataaatggaCACATGTAGGAATGTTTTATATAGTTTGGACTGACAGTAACCAAGCAAATGACAGCTACAGTCTGTCTACAGTGCTGTGAATTTTACAAAGGGCAGTACTACCTCATGGGATCATGCGAGTGCATTTCAATGGGCCGAGGAGTACCACCCGGGCCTCCGCGAGTAAGAGCGTCGATGAACCCGCGGACAACGGCACACCTCCTGGCCGTCCCAAACTCATCCAGGGTGTACCTGCACAGCGAGAGAAAGGGAAGCAAAGTcaccacagagagaaaatacaacTATGTGCCTGATGAATGCTA

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: protein phosphatase 1 regulatory subunit 12C

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13286 True 3527 lncRNA 0.42 2 4166778 4170338

Neighbor

gene id symbol gene type direction distance location
AMCG00016053 lhfp,LOC105029023,LOC107670626,LOC107740377,LOC107593461 coding downstream 61047 4104731 ~ 4105731 (-)
AMCG00016048 NA coding downstream 219343 3928734 ~ 3947435 (-)
AMCG00016050 NA coding downstream 331423 3823251 ~ 3835355 (-)
AMCG00016045 NA coding downstream 382282 3783534 ~ 3784496 (-)
AMCG00016047 NA coding downstream 498220 3622918 ~ 3668558 (-)
AMCG00016058 NA coding upstream 206107 4376445 ~ 4378160 (-)
AMCG00016059 foxo1 coding upstream 254650 4424988 ~ 4427749 (-)
AMCG00016063 NA coding upstream 273078 4443416 ~ 4451855 (-)
AMCG00016064 LOC105011210,LOC107718790 coding upstream 306001 4476339 ~ 4490665 (-)
AMCG00016062 NA coding upstream 337125 4507463 ~ 4517486 (-)
G10698 NA non-coding downstream 178823 3987653 ~ 3987955 (-)
G10696 NA non-coding downstream 187661 3977559 ~ 3979117 (-)
G10692 NA non-coding downstream 193267 3971886 ~ 3973511 (-)
G10673 NA non-coding downstream 254506 3869724 ~ 3912272 (-)
G10624 NA non-coding downstream 424516 3741593 ~ 3742262 (-)
G10735 NA non-coding upstream 184515 4354853 ~ 4355296 (-)
G10740 NA non-coding upstream 201127 4371465 ~ 4373721 (-)
G10805 NA non-coding upstream 416385 4586723 ~ 4587875 (-)
G10806 NA non-coding upstream 421482 4591820 ~ 4592077 (-)
G10812 NA non-coding upstream 452393 4622731 ~ 4623216 (-)
AMCG00016049 NA other downstream 246275 3886298 ~ 3920503 (-)
AMCG00016046 NA other downstream 624242 3528842 ~ 3542536 (-)
G10478 NA other downstream 1131595 3034422 ~ 3035183 (-)
AMCG00016029 NA other downstream 1320421 2784125 ~ 2846357 (-)
G10420 LOC101154678 other downstream 1456093 2710399 ~ 2710685 (-)
AMCG00016074 NA other upstream 733518 4903856 ~ 4929900 (-)
AMCG00016110 ufm1,LOC107701138 other upstream 3510573 7680911 ~ 7753437 (-)
AMCG00016119 NA other upstream 3948883 8119221 ~ 8124033 (-)
G11326 NA other upstream 4021208 8191546 ~ 8194432 (-)
AMCG00016134 NA other upstream 4653207 8823545 ~ 8827760 (-)

Expression


Co-expression Network