G10823


Basic Information

Item Value
gene id G10823
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 4639789 ~ 4641030 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU13412
CTCTGGTTTCGTTTATGAAATTACAGACCTGTTTTTAGAAAATGCTAGGCCATCGATTTGCCTTAACAGGATTCACAGAGACAATACTATTCCTTGTAGTATTAGAGACCATTTTTTCAAACAAGAAAAGCCATTACAGTGAAAAAGCAAAGGAACCTTccttttgtcatttttcattgtgtacattattattttaacatgcatACATTCCTTCAGTATTTATGCCTAATAATAtccctgtttttcattttatgaagacaagtttgttttatcaGTCTTGAAAGGaggaaataaatgttattgaaaatgCCATATTTACTTTTTCAAGAGGCAAAACTGTAAATCCTCCTAACAGCCTGCTATTTAATTGTGTTGACAGTACAAATCCTTCATTAAAGAGAGACTTCCTACCTGGCTTTCCAAGAGTAAAAAGAAAGCAGAACCAACAATATACCTCAGTTTAAAGCCTCACTGTGATTGTTAGCCCAGCCTTCCAAAAACCACAGTCCCATCAGTTATTTTCCAATACCTGGCTTTAGTCTAGTGCGGTTGGGTTAAAAGGATTGCTCTACTTCCTGAGATTTCATGAGAAAGTCTTTAGTGACATTTCTTCAGGGTggataatgtaattaaatgacgacaacaacaacaactcagAACAAACAGAAGTCTGGTACCTGTAAAAGTGAccaaagtaattttaaaatacatacatgcaacTGTAATAAGCAGTCCTTTTTTCCGTTTTAATATTCTAACCCAAAGTGCAATAAAATGTGtcaacatatacatacatagtgTTTCATCATTCCACACAGTTTAAGTTTCTAAACTATGATTACAGCTTTTGACCATAcgtagaaaaaaataaaaataataataagcatgcTTTCATGTTTACTTGTTCTGAAGCATGGATAAggaagaataaaatacacatctgTACATTGGtatcagggaaaaaaaagatacaaaatatttaataaactcaCTCCAATGCATAATTACAGCAGCTCAGACCTACTACACTACCGCAGAGCAGACAATCCATTGGTGGGTACATGGCATGTCCATGGGACACAAAAGCAGTCAGTGCAGAAGTTCAATACCtgataatgttttaatatattactATTGTAACCATTCTTGAATATAATCTGCATGAACCTTTAACAAGAGATTAACTaactgtacagtgaggggaaaaagtatttgatcccctgctgattttgtacgtttgcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13412 True 1242 lncRNA 0.43 1 4639789 4641030

Neighbor

gene id symbol gene type direction distance location
AMCG00016071 NA coding downstream 4162 4626584 ~ 4635627 (-)
AMCG00016072 LOC102232466,LOC105915781,LOC105011208,LOC106514111,LOC104923823 coding downstream 36516 4600941 ~ 4603273 (-)
AMCG00016073 LOC105011208,LOC102232466,LOC101073007,LOC103140675 coding downstream 57493 4576544 ~ 4582296 (-)
AMCG00016065 vps36,LOC107701118 coding downstream 107526 4518570 ~ 4532263 (-)
AMCG00016062 NA coding downstream 122303 4507463 ~ 4517486 (-)
AMCG00016068 NA coding upstream 2310 4643340 ~ 4664628 (-)
AMCG00016070 NA coding upstream 104239 4745269 ~ 4763349 (-)
AMCG00016069 LOC103044157,LOC107720662,LOC107556867 coding upstream 220455 4861485 ~ 4887805 (-)
AMCG00016075 NA coding upstream 291794 4932824 ~ 5269754 (-)
AMCG00016086 ltn1 coding upstream 1973675 6614705 ~ 6636697 (-)
G10821 NA non-coding downstream 1130 4638450 ~ 4638659 (-)
G10812 NA non-coding downstream 16573 4622731 ~ 4623216 (-)
G10806 NA non-coding downstream 47712 4591820 ~ 4592077 (-)
G10805 NA non-coding downstream 51914 4586723 ~ 4587875 (-)
G10740 NA non-coding downstream 266068 4371465 ~ 4373721 (-)
G10867 NA non-coding upstream 155797 4796827 ~ 4875011 (-)
G10883 NA non-coding upstream 317049 4958079 ~ 4958278 (-)
G10924 NA non-coding upstream 352166 4993196 ~ 5065889 (-)
G10926 NA non-coding upstream 465887 5106917 ~ 5108966 (-)
G10931 NA non-coding upstream 940402 5581432 ~ 5581688 (-)
AMCG00016049 NA other downstream 719286 3886298 ~ 3920503 (-)
AMCG00016046 NA other downstream 1097253 3528842 ~ 3542536 (-)
G10478 NA other downstream 1604606 3034422 ~ 3035183 (-)
AMCG00016029 NA other downstream 1793432 2784125 ~ 2846357 (-)
G10420 LOC101154678 other downstream 1929104 2710399 ~ 2710685 (-)
AMCG00016074 NA other upstream 262826 4903856 ~ 4929900 (-)
AMCG00016110 ufm1,LOC107701138 other upstream 3039881 7680911 ~ 7753437 (-)
AMCG00016119 NA other upstream 3478191 8119221 ~ 8124033 (-)
G11326 NA other upstream 3550516 8191546 ~ 8194432 (-)
AMCG00016134 NA other upstream 4182515 8823545 ~ 8827760 (-)

Expression


Co-expression Network