G10867


Basic Information

Item Value
gene id G10867
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 4796827 ~ 4875011 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU13464
gtgtgtgtgtgaagcggGGTGGgttatgttgttgtttatgtatatgaataattatatgtatattttgaatcatcatttgtcttttcaaaatattcagtACTATGGGCACAACCCATGGCTACTGTCCAACTTCTGAGCATGagtctgtatgtatgcatgagGAATTCCTCAACAAACCATTCATAAATTCGCCCATTCTGTAAATAAggctgtattatttaaaaatctgtccTGAAAGAGTAGCACATTGTGCAGCTTTCTAGAAGTACGGACTGTGATGCATTGAATAGACTCTTGCCACTAGTACCAAAAGCAAAAACTACCAAAGTGtgtcaaacatttttaattaatgttccCACCCCAATTAACCTGTAGTTCCACAATGTGTGCTGTCAGAGCTGGAAATTCATTTTCATTCGGCCTAAAAAGTGGCGGATGCCACAGAGGAAACTATATTATTGGACTGTTTGATATCCGTATTTCATGAAAGTGAATGtagagtattttattttccagtactGGCTAGAACCCATGCTTCAGTAATGCAAGAATGTAtgataatctaaaataaaaaataaaataaatgctttttgttaGGCTAAAGGTTCAAAAGAAACCGCTTGTTAcccttgtaaaatgtatacctACCTCAAATGAattccattaattaaattaagcgCATGTAtgaattgttaaattaattacaagTGTACTAACCTCCAACTATATTTACTTGCATATCTAATTTGTGTAAGACCAGAGTAAATGCATTGTGCCCATTGTTTATCAGATCTGTTACAAAAGTAACCGGTCTGGTCTGGTAAACAAAtgagacacactcactcaggTCTCACACGTTCATTTTCAGTGAACGTCGGTCACTTTAAACTTTGACATTTGAATAGTTGTCTGaaagattatataaaaataaacttgaacTGTTTTACTGTTTGAGGTAGAACAGAAAAGTTAATGTCTGACTAGTGAAATTATTGACCATTTTATCTCCACTTTGCAGCGATTCCTTCGTTCAGTTTTGATGAAGTGGTTGCATAACAGCAAAACCATGACACTGCATTAAACCATATTagccacaaacacacattgaaacAGATAAACCTACAAAAATATAACTGTAATACAGTTGATCCTATTGCCCAGTTCACACACATCCTCCATATTAAGATGGGTGATATTAGGAGGATATTCAATGAGAAACTCATGGATAAATACAATCTCAATGTTAGGAAAAcccatagacacacacacacatatatatcctAATGATGATATGCAGAGTgcagcatattattattattattattattattattattattattattattatta
>TU13465
atattattattattattattattattattattattattatttaactaatGGATACATGATAGAGTAAGAATATTACTTTGATGGCCATATACATCATTTTTCTGTAGATCGATTGTACGGGTAGACACAATTTTGCTTTGAGAAAAAGGGTGCCCTATAATGGAGGAAAGGAAATGCTGTGTATAACTAACTGTACATATTACAGTATGTCACATTACTCCGAATCTAATGTTAAGTTGGGGTGATGGggttgaattatatttttagctCATGGAAATACAGTTGCCTACCACAGAGGAGCTTTGTATAGTACACATTTCACATCAcgtaaataatgtttttctgaaTTGAAGGTCATGTATCAGTGTATAATTTACATCCTTCCGGACCATTCTGAATGTCATACTGCTGCGTGCATTCATAATGTTGAGTTCCTTTTGACGTGGCTTACTGTATTTATGCTcatgcaatgtaaaatacagaGTTGCAATTCGGGATCTGCTGCTgtaaataaaagtgcttttaaaaaaaaaacaggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13464 True 1353 lncRNA 0.34 2 4796827 4860892
TU13465 False 539 lncRNA 0.33 2 4859058 4875011

Neighbor

gene id symbol gene type direction distance location
AMCG00016070 NA coding downstream 33478 4745269 ~ 4763349 (-)
AMCG00016068 NA coding downstream 132199 4643340 ~ 4664628 (-)
AMCG00016071 NA coding downstream 161200 4626584 ~ 4635627 (-)
AMCG00016072 LOC102232466,LOC105915781,LOC105011208,LOC106514111,LOC104923823 coding downstream 193554 4600941 ~ 4603273 (-)
AMCG00016073 LOC105011208,LOC102232466,LOC101073007,LOC103140675 coding downstream 214531 4576544 ~ 4582296 (-)
AMCG00016075 NA coding upstream 57813 4932824 ~ 5269754 (-)
AMCG00016086 ltn1 coding upstream 1739694 6614705 ~ 6636697 (-)
AMCG00016081 NA coding upstream 1762321 6637332 ~ 6640537 (-)
AMCG00016084 cct8,LOC107693911,LOC107701129 coding upstream 1772296 6647307 ~ 6669012 (-)
AMCG00016087 grik1b,grik1,LOC105006673 coding upstream 1860935 6735946 ~ 6773094 (-)
G10823 NA non-coding downstream 155797 4639789 ~ 4641030 (-)
G10821 NA non-coding downstream 158168 4638450 ~ 4638659 (-)
G10812 NA non-coding downstream 173611 4622731 ~ 4623216 (-)
G10806 NA non-coding downstream 204750 4591820 ~ 4592077 (-)
G10805 NA non-coding downstream 208952 4586723 ~ 4587875 (-)
G10883 NA non-coding upstream 83068 4958079 ~ 4958278 (-)
G10924 NA non-coding upstream 118185 4993196 ~ 5065889 (-)
G10926 NA non-coding upstream 231906 5106917 ~ 5108966 (-)
G10931 NA non-coding upstream 706421 5581432 ~ 5581688 (-)
G10934 NA non-coding upstream 871325 5746336 ~ 5746567 (-)
AMCG00016049 NA other downstream 876324 3886298 ~ 3920503 (-)
AMCG00016046 NA other downstream 1254291 3528842 ~ 3542536 (-)
G10478 NA other downstream 1761644 3034422 ~ 3035183 (-)
AMCG00016029 NA other downstream 1950470 2784125 ~ 2846357 (-)
G10420 LOC101154678 other downstream 2086142 2710399 ~ 2710685 (-)
AMCG00016074 NA other upstream 28845 4903856 ~ 4929900 (-)
AMCG00016110 ufm1,LOC107701138 other upstream 2805900 7680911 ~ 7753437 (-)
AMCG00016119 NA other upstream 3244210 8119221 ~ 8124033 (-)
G11326 NA other upstream 3316535 8191546 ~ 8194432 (-)
AMCG00016134 NA other upstream 3948534 8823545 ~ 8827760 (-)

Expression


Co-expression Network