G10883


Basic Information

Item Value
gene id G10883
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 4958079 ~ 4958278 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU13491
gggatatattaggcagcaagtgaacattttgtcctcaaagttgatgtgttagaagcaggaaaaatgggcaagtgtaaggatctgagcgactttgacaagggccaaattgtgatggctagacgactgggtcagagcatctccaaaactgcagctcttgtggggtgttcccggtctgcagtggtcagtacctatcaaaagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13491 True 200 lncRNA 0.36 1 4958079 4958278

Neighbor

gene id symbol gene type direction distance location
AMCG00016069 LOC103044157,LOC107720662,LOC107556867 coding downstream 70274 4861485 ~ 4887805 (-)
AMCG00016070 NA coding downstream 194730 4745269 ~ 4763349 (-)
AMCG00016068 NA coding downstream 293451 4643340 ~ 4664628 (-)
AMCG00016071 NA coding downstream 322452 4626584 ~ 4635627 (-)
AMCG00016072 LOC102232466,LOC105915781,LOC105011208,LOC106514111,LOC104923823 coding downstream 354806 4600941 ~ 4603273 (-)
AMCG00016086 ltn1 coding upstream 1656427 6614705 ~ 6636697 (-)
AMCG00016081 NA coding upstream 1679054 6637332 ~ 6640537 (-)
AMCG00016084 cct8,LOC107693911,LOC107701129 coding upstream 1689029 6647307 ~ 6669012 (-)
AMCG00016087 grik1b,grik1,LOC105006673 coding upstream 1777668 6735946 ~ 6773094 (-)
AMCG00016083 LOC106581501,LOC107558811,LOC105006673,LOC107670116 coding upstream 1825259 6783537 ~ 6787509 (-)
G10867 NA non-coding downstream 83068 4796827 ~ 4875011 (-)
G10823 NA non-coding downstream 317049 4639789 ~ 4641030 (-)
G10821 NA non-coding downstream 319420 4638450 ~ 4638659 (-)
G10812 NA non-coding downstream 334863 4622731 ~ 4623216 (-)
G10806 NA non-coding downstream 366002 4591820 ~ 4592077 (-)
G10924 NA non-coding upstream 34918 4993196 ~ 5065889 (-)
G10926 NA non-coding upstream 148639 5106917 ~ 5108966 (-)
G10931 NA non-coding upstream 623154 5581432 ~ 5581688 (-)
G10934 NA non-coding upstream 788058 5746336 ~ 5746567 (-)
G10935 NA non-coding upstream 792640 5750918 ~ 5751334 (-)
AMCG00016074 NA other downstream 28179 4903856 ~ 4929900 (-)
AMCG00016049 NA other downstream 1037576 3886298 ~ 3920503 (-)
AMCG00016046 NA other downstream 1415543 3528842 ~ 3542536 (-)
G10478 NA other downstream 1922896 3034422 ~ 3035183 (-)
AMCG00016029 NA other downstream 2111722 2784125 ~ 2846357 (-)
AMCG00016110 ufm1,LOC107701138 other upstream 2722633 7680911 ~ 7753437 (-)
AMCG00016119 NA other upstream 3160943 8119221 ~ 8124033 (-)
G11326 NA other upstream 3233268 8191546 ~ 8194432 (-)
AMCG00016134 NA other upstream 3865267 8823545 ~ 8827760 (-)
AMCG00016176 NA other upstream 5876134 10834412 ~ 10847811 (-)

Expression


Co-expression Network