G10926


Basic Information

Item Value
gene id G10926
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 5106917 ~ 5108966 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU13540
TTTTGATgcttgcatattattttatttattcatttaaggAAAAACACAGTTGTAATtactgatgtgtgtgtttggtaaGTATGTGAATAATCATTcttaagaatatatatgtatttaagcaTGTTGCTTCAGTTTTTGGAACTGAACTTTGTAGAAGATGTAGTAGCCTTTGCTATACATGTATAGCAACTGATCTGCAGGGTTGTAATCAAGGTACACAAATCCTTCATATTGCTTATTGAAAGGAATGCTAATATAACTTTCCTCACCTGTCTGTGTATCAAATTTATAGAATATCTCCTCAGTGTAAAGGTTTAGTTGTCTTGTGGCATACAGAACTCCACACACCATGAAAGCATTGCTCACTCTTCGCCTAAATAAGTTTGTGTCCCACGTCTGCTCTAATGAAAaggtatttgtattaattttggaGAGGACTAGGTTACCCTTACTGGCTTCTGTTGCATAGATTACCCACAGCCCATTTTCATCTGCTGCAAAGTCAAAATCCTGATATGTGGCAGAACTGTAAGAGAACCTGCTGTTCCAAGCCGTGCCAGACAACACCCTGGTCTCAACGTTAAAAGTTGTTGCAtttattctgcatatatttccaCTATTATAGCAGTTATAATAGTAGTAATTCCCATACATGACATTGTTATTGCCATTCCCCTTGTTGTCATTTACCCAATTTTTATAGGAGTTTCTTAAAAGCAGGTTGGTGTAGTCTGAGTAAAGGTATATGTTGTTGGTGTAGGGGCTACTATACCCTGAATACCAGTAAATCTCCTCAAAGCCAGGCTTTGGCTTTGAATCTCTTCCCCATCCTCCATAAATGTAACCCTCACTAACATGGGCATTTAGCTGCACTATGTATGGCACGCTGACGTTAGTAATGCCTCCATGATTACAGGATCCAATTTCAGGCTTGAAAGATTCCTCACGCCACTTCTCGCAGTCCTCCAGTTTCTTCTGCAGTTTAATGAAGTCCCGCCGAATCACCAACAGGTTGTTCTTGTCATATCTCTCAAGCTGGTTCACCACTAATGTCATGTTTCGGATCTCTACATATAAATGGTCAAATATGACAGAAGAATTCACAGATTGTCTCAGCTCAGTGACCAGTTTCTCCATCTCCTGAAGCTCAATCCTCAGCATCTCAAACTCCAGCTGTGTGTACTTGTCAGGTTCCTTCTCCATTATCTCCACACGCACCGTCAGGTTCATCAGCTTCTGGACGTAGATGGCCAGTTTGCTTTCGTAGACTTTGAGCTGCAGCAACACAGTTAAAACAGTTAAAGCACTTCACTACACGCAGAGTGGCCCTGTTTCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13540 True 1337 lncRNA 0.34 3 5106917 5108966

Neighbor

gene id symbol gene type direction distance location
AMCG00016069 LOC103044157,LOC107720662,LOC107556867 coding downstream 219112 4861485 ~ 4887805 (-)
AMCG00016070 NA coding downstream 343568 4745269 ~ 4763349 (-)
AMCG00016068 NA coding downstream 442289 4643340 ~ 4664628 (-)
AMCG00016071 NA coding downstream 471290 4626584 ~ 4635627 (-)
AMCG00016072 LOC102232466,LOC105915781,LOC105011208,LOC106514111,LOC104923823 coding downstream 503644 4600941 ~ 4603273 (-)
AMCG00016086 ltn1 coding upstream 1505739 6614705 ~ 6636697 (-)
AMCG00016081 NA coding upstream 1528366 6637332 ~ 6640537 (-)
AMCG00016084 cct8,LOC107693911,LOC107701129 coding upstream 1538341 6647307 ~ 6669012 (-)
AMCG00016087 grik1b,grik1,LOC105006673 coding upstream 1626980 6735946 ~ 6773094 (-)
AMCG00016083 LOC106581501,LOC107558811,LOC105006673,LOC107670116 coding upstream 1674571 6783537 ~ 6787509 (-)
G10924 NA non-coding downstream 41028 4993196 ~ 5065889 (-)
G10883 NA non-coding downstream 148639 4958079 ~ 4958278 (-)
G10867 NA non-coding downstream 231906 4796827 ~ 4875011 (-)
G10823 NA non-coding downstream 465887 4639789 ~ 4641030 (-)
G10821 NA non-coding downstream 468258 4638450 ~ 4638659 (-)
G10931 NA non-coding upstream 472466 5581432 ~ 5581688 (-)
G10934 NA non-coding upstream 637370 5746336 ~ 5746567 (-)
G10935 NA non-coding upstream 641952 5750918 ~ 5751334 (-)
G10940 NA non-coding upstream 732511 5841477 ~ 5841704 (-)
G10952 NA non-coding upstream 780622 5889588 ~ 5889916 (-)
AMCG00016074 NA other downstream 177017 4903856 ~ 4929900 (-)
AMCG00016049 NA other downstream 1186414 3886298 ~ 3920503 (-)
AMCG00016046 NA other downstream 1564381 3528842 ~ 3542536 (-)
G10478 NA other downstream 2071734 3034422 ~ 3035183 (-)
AMCG00016029 NA other downstream 2260560 2784125 ~ 2846357 (-)
AMCG00016110 ufm1,LOC107701138 other upstream 2571945 7680911 ~ 7753437 (-)
AMCG00016119 NA other upstream 3010255 8119221 ~ 8124033 (-)
G11326 NA other upstream 3082580 8191546 ~ 8194432 (-)
AMCG00016134 NA other upstream 3714579 8823545 ~ 8827760 (-)
AMCG00016176 NA other upstream 5725446 10834412 ~ 10847811 (-)

Expression


Co-expression Network