Gene
RNA
| Item | Value |
|---|---|
| gene id | G11734 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 10715319 ~ 10715527 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0048570 | notochord morphogenesis | biological_process |
| GO:0030903 | notochord development | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU14508 | True | 209 | lncRNA | 0.38 | 1 | 10715319 | 10715527 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016173 | NA | coding | downstream | 597100 | 10075455 ~ 10118219 (-) |
| AMCG00016171 | NA | coding | downstream | 795545 | 9904963 ~ 9919774 (-) |
| AMCG00016172 | NA | coding | downstream | 810377 | 9904043 ~ 9904942 (-) |
| AMCG00016167 | NA | coding | downstream | 842894 | 9863271 ~ 9872425 (-) |
| AMCG00016169 | NA | coding | downstream | 881037 | 9833338 ~ 9834282 (-) |
| AMCG00016178 | NA | coding | upstream | 286213 | 11001740 ~ 11034263 (-) |
| AMCG00016177 | NA | coding | upstream | 318739 | 11034266 ~ 11126738 (-) |
| AMCG00016179 | NA | coding | upstream | 508929 | 11224456 ~ 11237516 (-) |
| AMCG00016185 | NA | coding | upstream | 728828 | 11444355 ~ 11445310 (-) |
| AMCG00016183 | NA | coding | upstream | 756199 | 11471726 ~ 11475792 (-) |
| G11733 | NA | non-coding | downstream | 3053 | 10712062 ~ 10712266 (-) |
| G11712 | NA | non-coding | downstream | 198557 | 10516552 ~ 10516762 (-) |
| G11701 | NA | non-coding | downstream | 385382 | 10329642 ~ 10329937 (-) |
| G11700 | LOC100846954,LOC107575789 | non-coding | downstream | 385728 | 10329146 ~ 10329591 (-) |
| G11699 | NA | non-coding | downstream | 386230 | 10328719 ~ 10329089 (-) |
| G11741 | NA | non-coding | upstream | 129659 | 10845186 ~ 10845402 (-) |
| G11751 | NA | non-coding | upstream | 192326 | 10907853 ~ 10908076 (-) |
| G11754 | NA | non-coding | upstream | 227999 | 10943526 ~ 10943774 (-) |
| G11759 | NA | non-coding | upstream | 262656 | 10978183 ~ 10978394 (-) |
| G11801 | NA | non-coding | upstream | 625343 | 11340870 ~ 11341449 (-) |
| AMCG00016134 | NA | other | downstream | 1887559 | 8823545 ~ 8827760 (-) |
| G11326 | NA | other | downstream | 2520887 | 8191546 ~ 8194432 (-) |
| AMCG00016119 | NA | other | downstream | 2591286 | 8119221 ~ 8124033 (-) |
| AMCG00016110 | ufm1,LOC107701138 | other | downstream | 2961882 | 7680911 ~ 7753437 (-) |
| AMCG00016074 | NA | other | downstream | 5785419 | 4903856 ~ 4929900 (-) |
| AMCG00016176 | NA | other | upstream | 118885 | 10834412 ~ 10847811 (-) |
| AMCG00016194 | NA | other | upstream | 1050625 | 11766152 ~ 11781547 (-) |
| AMCG00016203 | zdhhc20,LOC108438268,LOC106578454,LOC108256609 | other | upstream | 1116901 | 11832428 ~ 11947322 (-) |
| AMCG00016211 | NA | other | upstream | 1607634 | 12323161 ~ 12329033 (-) |
| AMCG00016226 | NA | other | upstream | 2134351 | 12849878 ~ 12870560 (-) |
