Gene
RNA
| Item | Value |
|---|---|
| gene id | G11996 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 12238785 ~ 12239014 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU14816 | True | 230 | lncRNA | 0.43 | 1 | 12238785 | 12239014 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016208 | sacs,LOC106612984 | coding | downstream | 2263 | 12208148 ~ 12236522 (-) |
| AMCG00016204 | LOC104943497 | coding | downstream | 295133 | 11906076 ~ 11943652 (-) |
| AMCG00016200 | NA | coding | downstream | 352592 | 11868787 ~ 11886193 (-) |
| AMCG00016199 | pdk3,LOC106578452 | coding | downstream | 371916 | 11848284 ~ 11866869 (-) |
| AMCG00016201 | NA | coding | downstream | 402364 | 11818088 ~ 11836421 (-) |
| AMCG00016210 | LOC106567911,LOC102798362,LOC104951736,LOC105923239,LOC107101883 | coding | upstream | 25260 | 12264274 ~ 12296060 (-) |
| AMCG00016209 | NA | coding | upstream | 57839 | 12296853 ~ 12320656 (-) |
| AMCG00016212 | NA | coding | upstream | 121561 | 12360575 ~ 12376528 (-) |
| AMCG00016217 | dscam,LOC106612992 | coding | upstream | 234249 | 12473263 ~ 12499001 (-) |
| AMCG00016216 | dscam,LOC105030490 | coding | upstream | 275344 | 12514358 ~ 12531045 (-) |
| G11865 | NA | non-coding | downstream | 500186 | 11738345 ~ 11738599 (-) |
| G11858 | LOC106904821 | non-coding | downstream | 521368 | 11701591 ~ 11717417 (-) |
| G11814 | NA | non-coding | downstream | 754992 | 11483562 ~ 11483793 (-) |
| G11807 | NA | non-coding | downstream | 838367 | 11400207 ~ 11400418 (-) |
| G11805 | NA | non-coding | downstream | 850660 | 11387731 ~ 11388125 (-) |
| G12041 | NA | non-coding | upstream | 114146 | 12353160 ~ 12353381 (-) |
| G12046 | NA | non-coding | upstream | 115661 | 12354675 ~ 12355364 (-) |
| G12058 | NA | non-coding | upstream | 148784 | 12387798 ~ 12391408 (-) |
| G12096 | NA | non-coding | upstream | 399479 | 12638493 ~ 12638698 (-) |
| G12235 | NA | non-coding | upstream | 858977 | 13097991 ~ 13100224 (-) |
| AMCG00016203 | zdhhc20,LOC108438268,LOC106578454,LOC108256609 | other | downstream | 291463 | 11832428 ~ 11947322 (-) |
| AMCG00016194 | NA | other | downstream | 457238 | 11766152 ~ 11781547 (-) |
| AMCG00016176 | NA | other | downstream | 1390974 | 10834412 ~ 10847811 (-) |
| AMCG00016134 | NA | other | downstream | 3411025 | 8823545 ~ 8827760 (-) |
| G11326 | NA | other | downstream | 4044353 | 8191546 ~ 8194432 (-) |
| AMCG00016211 | NA | other | upstream | 84147 | 12323161 ~ 12329033 (-) |
| AMCG00016226 | NA | other | upstream | 610864 | 12849878 ~ 12870560 (-) |
| AMCG00016246 | prdm15,LOC108413920,LOC102786849 | other | upstream | 1304334 | 13543348 ~ 13559184 (-) |
| AMCG00016281 | NA | other | upstream | 2181342 | 14420356 ~ 14427290 (-) |
| AMCG00016293 | NA | other | upstream | 2546184 | 14785198 ~ 14791969 (-) |
