Gene
RNA
| Item | Value |
|---|---|
| gene id | G12811 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 15834822 ~ 15835082 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU15859 | True | 261 | lncRNA | 0.41 | 1 | 15834822 | 15835082 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016315 | NA | coding | downstream | 10556 | 15804860 ~ 15824266 (-) |
| AMCG00016317 | NA | coding | downstream | 76799 | 15742441 ~ 15758023 (-) |
| AMCG00016316 | NA | coding | downstream | 94476 | 15735096 ~ 15740346 (-) |
| AMCG00016309 | NA | coding | downstream | 210370 | 15621056 ~ 15624452 (-) |
| AMCG00016308 | trpc6a,LOC108429885,LOC108264040,LOC107691992,LOC107713306 | coding | downstream | 238022 | 15577433 ~ 15596800 (-) |
| AMCG00016319 | NA | coding | upstream | 6177 | 15841259 ~ 15849112 (-) |
| AMCG00016321 | NA | coding | upstream | 55178 | 15890260 ~ 15902820 (-) |
| AMCG00016320 | tenm4 | coding | upstream | 86015 | 15921097 ~ 16030468 (-) |
| AMCG00016318 | tenm4,LOC107740368 | coding | upstream | 222027 | 16057109 ~ 16061718 (-) |
| AMCG00016328 | NA | coding | upstream | 573273 | 16408355 ~ 16409278 (-) |
| G12810 | NA | non-coding | downstream | 5255 | 15829355 ~ 15829567 (-) |
| G12809 | NA | non-coding | downstream | 5796 | 15828766 ~ 15829026 (-) |
| G12807 | NA | non-coding | downstream | 9585 | 15824911 ~ 15825237 (-) |
| G12743 | NA | non-coding | downstream | 229335 | 15547050 ~ 15605487 (-) |
| G12707 | cntn5 | non-coding | downstream | 417304 | 15417023 ~ 15417518 (-) |
| G12812 | NA | non-coding | upstream | 112 | 15835194 ~ 15836468 (-) |
| G12814 | NA | non-coding | upstream | 2753 | 15837835 ~ 15840792 (-) |
| G12838 | NA | non-coding | upstream | 388403 | 16223485 ~ 16223728 (-) |
| G12867 | NA | non-coding | upstream | 632535 | 16467617 ~ 16467819 (-) |
| G12868 | NA | non-coding | upstream | 632891 | 16467973 ~ 16468272 (-) |
| AMCG00016293 | NA | other | downstream | 1042853 | 14785198 ~ 14791969 (-) |
| AMCG00016281 | NA | other | downstream | 1407532 | 14420356 ~ 14427290 (-) |
| AMCG00016246 | prdm15,LOC108413920,LOC102786849 | other | downstream | 2275638 | 13543348 ~ 13559184 (-) |
| AMCG00016226 | NA | other | downstream | 2964262 | 12849878 ~ 12870560 (-) |
| AMCG00016211 | NA | other | downstream | 3505789 | 12323161 ~ 12329033 (-) |
| AMCG00016327 | NA | other | upstream | 635529 | 16470611 ~ 16475170 (-) |
| G12945 | ucp2,ucp2b,LOC106567822 | other | upstream | 1023459 | 16858541 ~ 16861179 (-) |
| AMCG00016345 | NA | other | upstream | 1031236 | 16866318 ~ 16870002 (-) |
| AMCG00016360 | aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 | other | upstream | 1428519 | 17263601 ~ 17266747 (-) |
| AMCG00016376 | NA | other | upstream | 1702952 | 17538034 ~ 17541342 (-) |
