G13615


Basic Information

Item Value
gene id G13615
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 20003149 ~ 20004940 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU16865
CCCTGCTACGTGCATAATGAGTGTTCCACACCAGTGACGTGTGGTGGAAATGGTGGCTTTAGCCCAGTTTTACctgctgttttctttatttgctgCTCGGTTTCCAGTTGGGATTGAAGTGGCTTTTCAGAGGTTCCCAGCACTTGTAATAGTTCTTATCCAGACGATTACAGGTGTCCTCTGCCACGCGCTCTGGCTTCAGGTCGGCCCCGCTGGCTTTCTCAAAGCACTCGCTGTCGGGGCCGTGCGGGGTCATTATGCTGTGAAGACTGGCCCCTCCTGGCTGGAAACCTTCCTCCTTGGCCTCGTAGTAACCTTTGATCAAGCCCATGAACTCACTCATGCAGTTCCCTAACGCACAGAAGGCACTGTAAAAACTTTGGACATTGAGGAACACTTTTCACTGAACCCACAAGAATGTGCCTCTGTTAGTTAGTGAGGGGGATAATTTCGATTTCATTACTTGTCATGGGAGCCCAATTATAGGAAAACCATGAACCATGATATTAAATTCATAtgaagctttatttatttatattcactgCATGACCAACAAATCTGGAGTCACGTGAAGGTCCCATGATGTGGCATTTAAGCAGGCTGACTCAATGGGGTGAGTTTCATCATTCTCAAAAGTTACTGGCTTCAGCCTCTGTGCTCAAGGTTCATCCTCTTCCAACCACGTATCCTGTCCACTGAACCCACCAATCCCAGAGCACCATCCCCGCCCCACCCCTCCCTGGCCTCCTGCCCAGCCTTACTGTGGTAGTACGGGGGCCTGAACGTGTGGTCAGCAACCCCCCACCGTGGGGGAAAGATGACAAAGTCTGCAATAGCCACACCGGGGCGAGTGGACTTGGCTGTCAGCACCGTGAAGATGGAGGGATCCTGAGAAAAGGCACAAAGCAGACTTGGATACCTAAAACTGCACTTGATTGAAAATTGATACTTTAATTACAGACCTCCCACAAAAACCCATACAGGTTTAAATCAACAGCTTATTGATTCATAGGTCTTTTTTATAATCTTAtacaatagtttattttgtctgtcaCAGTGTCTCGCTGCAGAGCCTTCTGAAGACAGCACACCAGTGTAGGCAGTTCTGAATTATTCATAGGAGGTCGAGTGCTTTATCTGAGGGGTTGTCCAATCATTTCCATAAGAGAAACCTGATGTTCTGACTAGGTTACACAATGTTTGCACAGTGCCGTGTGTACATGCCTGATGTGAGGTTTCAGGTGCGGACTAGAGCAGTGTGGGGGAATGACCCAGCTTGGAGTAAATCATAAGCCATGTCTTTTC

Function

GO: NA

KEGG:

id description
ko04514 Cell adhesion molecules

RNA

RNA id representative length rna type GC content exon number start site end site
TU16865 True 1305 lncRNA 0.47 2 20003149 20004940

Neighbor

gene id symbol gene type direction distance location
AMCG00016440 NA coding downstream 23225 19969592 ~ 19979924 (-)
AMCG00016437 NA coding downstream 121324 19880271 ~ 19881825 (-)
AMCG00016433 NA coding downstream 128255 19872617 ~ 19874894 (-)
AMCG00016434 NA coding downstream 131847 19869693 ~ 19871302 (-)
AMCG00016436 NA coding downstream 137454 19861454 ~ 19865695 (-)
AMCG00016444 NA coding upstream 983 20005923 ~ 20007711 (-)
AMCG00016445 NA coding upstream 12440 20017380 ~ 20031020 (-)
AMCG00016442 NA coding upstream 26491 20031431 ~ 20040137 (-)
AMCG00016443 NA coding upstream 38410 20043350 ~ 20060165 (-)
AMCG00016446 NA coding upstream 66808 20071748 ~ 20082592 (-)
G13414 NA non-coding downstream 744592 19258323 ~ 19258557 (-)
G13413 NA non-coding downstream 746230 19256638 ~ 19256919 (-)
G13392 NA non-coding downstream 749735 19165586 ~ 19253414 (-)
G13366 NA non-coding downstream 914517 19088224 ~ 19088632 (-)
G13341 NA non-coding downstream 925326 19077368 ~ 19077823 (-)
G13680 NA non-coding upstream 310802 20315742 ~ 20316579 (-)
G13762 NA non-coding upstream 463306 20468246 ~ 20513404 (-)
G13766 NA non-coding upstream 481941 20486881 ~ 20492021 (-)
G13789 NA non-coding upstream 590389 20595329 ~ 20598765 (-)
G13806 NA non-coding upstream 641896 20646836 ~ 20652268 (-)
G13367 NA other downstream 897768 19091239 ~ 19105381 (-)
AMCG00016376 NA other downstream 2461807 17538034 ~ 17541342 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other downstream 2736402 17263601 ~ 17266747 (-)
AMCG00016345 NA other downstream 3133147 16866318 ~ 16870002 (-)
G12945 ucp2,ucp2b,LOC106567822 other downstream 3141970 16858541 ~ 16861179 (-)
AMCG00016453 NA other upstream 123968 20128908 ~ 20135547 (-)
AMCG00016479 NA other upstream 611569 20616509 ~ 20636960 (-)
AMCG00016480 NA other upstream 661202 20666142 ~ 20683024 (-)
G13962 NA other upstream 3450152 23455092 ~ 23455811 (-)
G13969 NA other upstream 3694209 23699149 ~ 23700255 (-)

Expression


Co-expression Network