G13766


Basic Information

Item Value
gene id G13766
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 20486881 ~ 20492021 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU17055
gaaaaagtgaagcgctgtgaatactctccggatgcactgtatacctGTGATTTGGTTTAAAGTCGGCAAATAAAGGGTTAGTCTAAGAGCTTGTAGGCTGACATGATTAAACCGTTTCATTTTGTTCTTAAACCCTctattgtgtttaataaattCTAGGTATATCTACctgtaaaatacagaaaaactacaaatccTTCTAACATTTCTGGTGAAAATGCTGATGGATTTTTCTAGGTGCATTTCAGACAGGATTTTCAGTAGTCTAGTTACATCAAAGCAAACAATGGTCTTCCCCTCTGCTGCAGAAATTCTAAGGTGCCTTTGACAAAAGTGAAgagctgtgaatactttctggatgcactgtatttgaAGTGAAAAGTTATGTCTAACttaggacaaaaaaacaaaacagattgcAGATGAAGAGTTTGTGGAAGAAATCAAGAGTGAAAATGCAATGccaagcaaagcaaagcaaagcaaaaggAAACATATTGTCGAGGCCTGCATCCAGCAGTAGATCAATATAGTGATagtgatgtgtatatatacacgtcattttattttttgagatcCTGTCTTAAAACCTTCAGTGTTCAGTTGTTGTTGTAGCTGCAGATACAAAAGGAGATGATACGCTTTATTTCAATACACTGCAGTGGCAGCCCAGCAACACAAATGTCACCGCACTAATGTGTCCTGTTTGGCCACGGCCGAATGACCCTCTCATGAAAGAGGCGAAAATGTCCCCTGAGCTATAGCTTTTACACAacgggataaaaaaaaaaacaataataactgaTCGAGCTACTTACACCAGGGTCGTCCTCCTCATCCGCCATTCTGGCTCCAGCTGAGGCAGCAATGGTAGCGACTGTTGTGAACCTTAGTAAACACACTGTAAAACCACCACGATCGGGATTTGCACGCCAAATACAACTGTCAAACAAcgagtgaaaaataaatatttaatttgacaaaaacagaacagtaaTCTCAATTATCTAGCAAGAAGAAACAAATAGGGTATCCAACTTGATCAAGGACTTCCGGTGGCGTGGATCACGTGCCCTTACACTACAATTGGTCTGTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17055 True 1097 lncRNA 0.39 2 20486881 20492021

Neighbor

gene id symbol gene type direction distance location
AMCG00016471 NA coding downstream 39850 20441545 ~ 20447031 (-)
AMCG00016470 prdx4,prdx2 coding downstream 61131 20421954 ~ 20425750 (-)
AMCG00016472 sat1a.1,sat1,LOC107654323,LOC107734365,LOC107665519,LOC107591481,LOC107725087 coding downstream 81105 20401388 ~ 20405776 (-)
AMCG00016473 sat1a.2,sat1,LOC107562204,LOC107591482,LOC107725150,LOC107654323 coding downstream 88132 20393597 ~ 20398749 (-)
AMCG00016460 kif3a coding downstream 107749 20372554 ~ 20379132 (-)
AMCG00016477 NA coding upstream 14827 20506848 ~ 20510468 (-)
AMCG00016476 NA coding upstream 25778 20517799 ~ 20523757 (-)
AMCG00016481 NA coding upstream 431959 20923980 ~ 20973210 (-)
AMCG00016483 NA coding upstream 494971 20986992 ~ 21012361 (-)
AMCG00016484 NA coding upstream 582073 21074094 ~ 21245418 (-)
G13680 NA non-coding downstream 170302 20315742 ~ 20316579 (-)
G13615 NA non-coding downstream 481941 20003149 ~ 20004940 (-)
G13414 NA non-coding downstream 1228324 19258323 ~ 19258557 (-)
G13413 NA non-coding downstream 1229962 19256638 ~ 19256919 (-)
G13392 NA non-coding downstream 1233467 19165586 ~ 19253414 (-)
G13789 NA non-coding upstream 103308 20595329 ~ 20598765 (-)
G13806 NA non-coding upstream 154815 20646836 ~ 20652268 (-)
G13812 NA non-coding upstream 269402 20761423 ~ 20761693 (-)
G13819 NA non-coding upstream 415897 20907918 ~ 20908118 (-)
G13860 NA non-coding upstream 1290043 21782064 ~ 21782296 (-)
AMCG00016453 NA other downstream 351334 20128908 ~ 20135547 (-)
G13367 NA other downstream 1381500 19091239 ~ 19105381 (-)
AMCG00016376 NA other downstream 2945539 17538034 ~ 17541342 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other downstream 3220134 17263601 ~ 17266747 (-)
AMCG00016345 NA other downstream 3616879 16866318 ~ 16870002 (-)
AMCG00016479 NA other upstream 124488 20616509 ~ 20636960 (-)
AMCG00016480 NA other upstream 174121 20666142 ~ 20683024 (-)
G13962 NA other upstream 2963071 23455092 ~ 23455811 (-)
G13969 NA other upstream 3207128 23699149 ~ 23700255 (-)
AMCG00016504 NA other upstream 3349041 23841062 ~ 23862739 (-)

Expression


Co-expression Network