G13920


Basic Information

Item Value
gene id G13920
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 22801206 ~ 22845547 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU17241
gaagagcagcatgtatattgtttatgttgtcagctctgagctgatcctcaaaatacaatataaatatagggagtttgtggtttgacatttccaagataGAGTCAAGGGAAAGGCCGTGGGTTCAAGTGTCTAGActtacacagaaacacagttaTGTGCGAGTatgttatttttgcaataaTGACAAGTTTCAGCCCCCCTGCCACggcaacatttccagtgagatatgtcAATGTCAAATCTGCAGCGTCTGTTCTAATCTAATCCtataataagaatacaatacaatgagttacatggttacagtaggttaaataatcagtatgcctaccaaacttaattatccccaacagttagtatatgaatatgttatataaaaatcctt

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU17241 True 385 lncRNA 0.50 2 22801206 22845547

Neighbor

gene id symbol gene type direction distance location
AMCG00016497 NA coding downstream 715864 22077617 ~ 22085342 (-)
AMCG00016487 NA coding downstream 780475 22017124 ~ 22020731 (-)
AMCG00016488 NA coding downstream 849013 21949268 ~ 21952193 (-)
AMCG00016486 NA coding downstream 879567 21910870 ~ 21921639 (-)
AMCG00016485 igsf11 coding downstream 1091517 21688811 ~ 21709689 (-)
AMCG00016512 NA coding upstream 1047876 23893423 ~ 23902805 (-)
AMCG00016510 NA coding upstream 1071396 23916943 ~ 23925716 (-)
AMCG00016514 NA coding upstream 1082344 23927891 ~ 23931580 (-)
AMCG00016513 NA coding upstream 1089356 23934903 ~ 23937234 (-)
AMCG00016511 NA coding upstream 1099647 23945194 ~ 23951329 (-)
G13916 NA non-coding downstream 18714 22781706 ~ 22782492 (-)
G13906 NA non-coding downstream 19551 22781317 ~ 22781655 (-)
G13914 NA non-coding downstream 19941 22780863 ~ 22781265 (-)
G13912 NA non-coding downstream 218462 22582506 ~ 22582744 (-)
G13910 NA non-coding downstream 298498 22502506 ~ 22502708 (-)
G13929 NA non-coding upstream 69276 22914823 ~ 22915139 (-)
G13930 NA non-coding upstream 70928 22916475 ~ 22922191 (-)
G13942 NA non-coding upstream 246740 23092287 ~ 23093836 (-)
G13952 NA non-coding upstream 501459 23347006 ~ 23347351 (-)
G13954 NA non-coding upstream 501893 23347440 ~ 23347712 (-)
AMCG00016480 NA other downstream 2118182 20666142 ~ 20683024 (-)
AMCG00016479 NA other downstream 2164246 20616509 ~ 20636960 (-)
AMCG00016453 NA other downstream 2665659 20128908 ~ 20135547 (-)
G13367 NA other downstream 3695825 19091239 ~ 19105381 (-)
AMCG00016376 NA other downstream 5259864 17538034 ~ 17541342 (-)
G13962 NA other upstream 609545 23455092 ~ 23455811 (-)
G13969 NA other upstream 853602 23699149 ~ 23700255 (-)
AMCG00016504 NA other upstream 995515 23841062 ~ 23862739 (-)
AMCG00016505 NA other upstream 1019034 23864581 ~ 23885258 (-)
AMCG00016531 NA other upstream 1463709 24309256 ~ 24323458 (-)

Expression


Co-expression Network