G13952


Basic Information

Item Value
gene id G13952
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 23347006 ~ 23347351 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU17276
CCCAAATAGAGTCAACCAAATCATAAAGATAACCAAAACCTCCTATCTGGAACATTGGAACAATGAAACCAAATCCCAAAGTAAACTGGATTGCTATCGGGCCCTAAACAGAGAATACACCCTGGCAGAgtatctcttcactgtcagagatacgaagcagagacggatcctgaccaagtacaggctcagtgaccacagcctggccatagagACAGGCCGaaacaggcagagctggctgcccagagaggagcggcgctgtggtcactgcgagacaggagaggtcgagacagagatgcacttcctcctccactgcaataaatataccaaattaagggacacattcttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17276 True 346 lncRNA 0.49 1 23347006 23347351

Neighbor

gene id symbol gene type direction distance location
AMCG00016497 NA coding downstream 1261664 22077617 ~ 22085342 (-)
AMCG00016487 NA coding downstream 1326275 22017124 ~ 22020731 (-)
AMCG00016488 NA coding downstream 1394813 21949268 ~ 21952193 (-)
AMCG00016486 NA coding downstream 1425367 21910870 ~ 21921639 (-)
AMCG00016485 igsf11 coding downstream 1637317 21688811 ~ 21709689 (-)
AMCG00016512 NA coding upstream 546072 23893423 ~ 23902805 (-)
AMCG00016510 NA coding upstream 569592 23916943 ~ 23925716 (-)
AMCG00016514 NA coding upstream 580540 23927891 ~ 23931580 (-)
AMCG00016513 NA coding upstream 587552 23934903 ~ 23937234 (-)
AMCG00016511 NA coding upstream 597843 23945194 ~ 23951329 (-)
G13942 NA non-coding downstream 253170 23092287 ~ 23093836 (-)
G13930 NA non-coding downstream 424815 22916475 ~ 22922191 (-)
G13929 NA non-coding downstream 431867 22914823 ~ 22915139 (-)
G13920 NA non-coding downstream 501459 22801206 ~ 22845547 (-)
G13916 NA non-coding downstream 564514 22781706 ~ 22782492 (-)
G13954 NA non-coding upstream 89 23347440 ~ 23347712 (-)
G13956 NA non-coding upstream 10110 23357461 ~ 23357692 (-)
G13957 NA non-coding upstream 11020 23358371 ~ 23358814 (-)
G13990 NA non-coding upstream 533608 23880959 ~ 23882959 (-)
G14012 NA non-coding upstream 585658 23933009 ~ 23933843 (-)
AMCG00016480 NA other downstream 2663982 20666142 ~ 20683024 (-)
AMCG00016479 NA other downstream 2710046 20616509 ~ 20636960 (-)
AMCG00016453 NA other downstream 3211459 20128908 ~ 20135547 (-)
G13367 NA other downstream 4241625 19091239 ~ 19105381 (-)
AMCG00016376 NA other downstream 5805664 17538034 ~ 17541342 (-)
G13962 NA other upstream 107741 23455092 ~ 23455811 (-)
G13969 NA other upstream 351798 23699149 ~ 23700255 (-)
AMCG00016504 NA other upstream 493711 23841062 ~ 23862739 (-)
AMCG00016505 NA other upstream 517230 23864581 ~ 23885258 (-)
AMCG00016531 NA other upstream 961905 24309256 ~ 24323458 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G188749 NA non-coding NC_053129.1 CM020926.1 31597215 ~ 31597715 (+)