G14843


Basic Information

Item Value
gene id G14843
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 26568669 ~ 26571641 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU18445
ttgtttctcattttccaattttatttaattgggtgTACAAATGGGTTTtgataatagaaaacaaaagtgattaAAATCGATTTTCAAAATTCACCTGCCTTCTCTACAGCCTGATGTCCGAGACGCTCCTAATGCGAACGTCATGTGTTCACTAATTCCACTGACTGTGTTAAGAAGCCAGAGATGCGCCCTAGTAAACTCtgttgggggaagaaaaaaaaaataatatacactaTCTGGTTGGTTGAGGACATTGgttttgtggtttaaaaaggATATAGAGCCGAcctatgaaaaaaatgtaaggttTAACCACAGCTGCCTACATCTGTCAGTATGTACCAAGGGGGTGGGAACACTCCCCTGCCACCCGCTCCTATAACCGGCTTCTGCTCCCCTTTGCATGGCCCAGCAGTTTAAATGCGATGAGCGCCTTTTTCTTTTGGAAACTGTCCAGAAATGCCCCAAAAACAGCAAtgtggaaaacacaaaaaaaccaaaaaaaaacacaaacagccaGGGAGAACCTCGCGCACAACGCAGCACAACGACGCACAGCCCTCGCTGGGCTCGGTCACTCTCTCTTTTCGCTGGGCGCTTCCTCGGGTGCAGGCTCCGGGGGTGGCTCCTCGGGGGGGGCGCTGTTGCTCTCGGAGCCGGTGTTGCTGTCGCTGGTCCCCTCCTCCATCACGCTGTCGCCGCCCTCCGGGACGCTTTCCTTGTCCTCCGTGGTGGACGCCCCCTCCTCGCTAGGCTGCTGCCCCTCCAACACCTCCTCTGCCCTGGGCTCCTCCGCTGCCTGCTGACCTGTCTCCATGGAGGTGCTCTCggcctcctcctcttcctcttcctcctcctttttgGCCCCCTCCTCCGGCTCTTCCTCGGGGGGCTTGGCTGTGGCGGCGGCTTCAcgcttctcctcctccagggcgGCGGCAGCGGCTGCTCTCTCCGCCTGCTCGGCCGCCTCGCGCTCCCGCTCCTCCGCCCGCCGCCGCGCAGCCTCCTCCGCAGCCGCAATCTCCGCCGCTATCTTCTCCATGTCCACCTCCACCTTCAGGCTGCACA
>TU18448
ttgtttctcattttccaattttatttaattgggtgTACAAATGGGTTTtgataatagaaaacaaaagtgattaAAATCGATTTTCAAAATTCACCTGCCTTCTCTACAGCCTGATGTCCGAGACGCTCCTAATGCGAACGTCATGTGTTCACTAATTCCACTGACTGTGTTAAGAAGCCAGAGATGCGCCCTAGTAAACTCtgttgggggaagaaaaaaaaaataatatacactaTCTGGTTGGTTGAGGACATTGgttttgtggtttaaaaaggATATAGAGCCGAcctatgaaaaaaatgtaaggttTAACCACAGCTGCCTACATCTGTCAGTATGTACCAAGGGGGTGGGAACACTCCCCTGCCACCCGCTCCTATAACCGGCTTCTGCTCCCCTTTGCATGGCCCAGCAGTTTAAATGCGATGAGCGCCTTTTTCTTTTGGAAACTGTCCAGAAATGCCCCAAAAACAGCAAtgtggaaaacacaaaaaaaccaaaaaaaaacacaaacagccaGGGAGAACCTCGCGCACAACGCAGCACAACGACGCACAGCCCTCGCTGGGCTCGGTCACTCTCTCTTTTCGCTGGGCGCTTCCTCGGGTGCAGGCTCCGGGGGTGGCTCCTCGGGGGGGGCGCTGTTGCTCTCGGAGCCGGTGTTGCTGTCGCTGGTCCCCTCCTCCATCACGCTGTCGCCGCCCTCCGGGACGCTTTCCTTGTCCTCCGTGGTGGACGCCCCCTCCTCGCTAGGCTGCTGCCCCTCCAACACCTCCTCTGCCCTGGGCTCCTCTGTCTCCATGGAGGTGCTCTCggcctcctcctcttcctcttcctcctcctttttgGCCCCCTCCTCCGGCTCTTCCTCGGGGGGCTTGGCTGTGGCGGCGGCTTCAcgcttctcctcctccagggcgGCGGCAGCGGCTGCTCTCTCCGCCTGCTCGGCCGCCTCGCGCTCCCGCTCCTCCGCCCGCCGCCGCGCAGCCTCCTCCGCAGCCGCAATCTCCGCCGCTATCTTCTCCATGTCCACCTCCACCTTCAGGCTGCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18445 True 1071 TUCP 0.34 2 26568669 26571641
TU18448 False 1056 TUCP 0.42 2 26568669 26571641

Neighbor

gene id symbol gene type direction distance location
AMCG00016634 NA coding downstream 121849 26442159 ~ 26446820 (-)
AMCG00016630 eif1b,LOC105888686,LOC107549864,LOC103043673 coding downstream 186940 26380048 ~ 26381729 (-)
AMCG00016627 NA coding downstream 194067 26373019 ~ 26374602 (-)
AMCG00016628 NA coding downstream 225055 26339493 ~ 26343614 (-)
AMCG00016629 LOC108438403 coding downstream 259306 26304915 ~ 26309363 (-)
AMCG00016645 NA coding upstream 83947 26655588 ~ 26660740 (-)
AMCG00016642 NA coding upstream 90445 26662086 ~ 26664301 (-)
AMCG00016649 NA coding upstream 150146 26721787 ~ 26732090 (-)
AMCG00016648 NA coding upstream 171943 26743584 ~ 26749062 (-)
AMCG00016651 tbkbp1 coding upstream 245167 26816808 ~ 26822326 (-)
G14832 NA non-coding downstream 45622 26522804 ~ 26523047 (-)
G14818 NA non-coding downstream 100570 26430455 ~ 26468099 (-)
G14775 NA non-coding downstream 143419 26425032 ~ 26425250 (-)
G14765 NA non-coding downstream 173244 26394932 ~ 26395425 (-)
G14723 NA non-coding downstream 265210 26275177 ~ 26303459 (-)
G14882 NA non-coding upstream 169444 26741085 ~ 26742338 (-)
G14943 nfe2l1,nfe2l1b,LOC107565927 non-coding upstream 407517 26979158 ~ 26983486 (-)
G14999 NA non-coding upstream 672325 27243966 ~ 27245247 (-)
G15001 hoxb5a,LOC104941372,LOC103365501,LOC108278507,LOC108413114 non-coding upstream 692072 27263713 ~ 27265603 (-)
G15016 hoxb9 non-coding upstream 724444 27296085 ~ 27308958 (-)
G14816 LOC108438405,LOC108438407,LOC107666325,LOC107563033,LOC107666324,LOC107753907 other downstream 48272 26427339 ~ 26520397 (-)
AMCG00016623 NA other downstream 327279 26239082 ~ 26241390 (-)
G14676 NA other downstream 383891 26181744 ~ 26184778 (-)
AMCG00016616 sp6,LOC102212756,LOC101463567,LOC100707362,LOC107396441,LOC106564946,LOC103384358 other downstream 408747 26156521 ~ 26159922 (-)
AMCG00016617 NA other downstream 419126 26147510 ~ 26149543 (-)
AMCG00016643 NA other upstream 10885 26582526 ~ 26592300 (-)
AMCG00016644 NA other upstream 55066 26626707 ~ 26643493 (-)
AMCG00016662 cbx1,cbx1b,LOC108279860 other upstream 423532 26995173 ~ 27003707 (-)
AMCG00016671 hoxb6ab,hoxb6,hoxb6a,LOC105013254,LOC103045875,LOC107582892 other upstream 694246 27265887 ~ 27279334 (-)
G15026 NA other upstream 797949 27369590 ~ 27370139 (-)

Expression


Co-expression Network