G14882


Basic Information

Item Value
gene id G14882
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 26741085 ~ 26742338 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU18490
ttataattagtattattattattattattattattattataaactgcCTAAAACAGCTGAAGTTGTAATGCAACACAGCAAATCCTTGGCTCTGATCAGCGAGAGGCAGGTCGCACTGCCTGTGGTAAACGGGTCCCTCTAGTGGCCATTATGAGTTCAGTACTGTAGTGGTGGGACAGATAATAAGCGAGCCACTGGCGCCACCAGGTGTCAGCCGGCTGTCAGCGCTTTTGCTGTTTCTTTCTTCATCTGATTTTCTGGCGGATTGGCGGCAGAAGCATAAAATACGAGAACACGCACAGCAGGGCAGTGTAATAAAGGAGCAATacattatgtgtttgtttggtttttatatcCAGTCCCAAACcagaattgttatttttaatttaatttttttaagtgtaaagAAGTGCAATTAGGGAGGCATGGGCTGGGGTGgggcagttatttatttatttatttatttttaaatcccagcTCCTCAAAATGAGAAGACCCATAGTGAGGTTTCTTGACTATTTGAGACAATCGGTATTTGCACTTGctcttttatatacatattgatgttcctttgtgcattttttaaaatctttttttggAACCTCTGATgtgcacaaaaacaacacaagttGTGTGTTATATGTGTCTGTTTGACCGAGACAGGCTGCAGAGGAGCCGTGTAAAACAGTGCACGTCTGTCTCCTGGTTTTGTCCTGTCTGCGACTCTGTagttttgtgtttctgcagtgcGGAGCCGCCTGCCTGAGACTCAGCTGCACAGAGAAGCACAATGAATAAACGAGTAACAGCGGTCTATGACGTCTTCCTTGCACTCATTAACATCCAACAGtagatagaaaaaatatataattcccATAATGGCCTTAACCCTCGCCCCCCCCAACCCAacccaagaaaaataaatgtaattcccAGCATCTTTGGTGATTCTGAGGAGTTTTAATGGAAGCTAAACATGGACCATCTTTAATTTAACCCCCCCTCTCACTCTCCTCACCCCAAACAGTAATATGTGTTCAGATGGTGGGGCAGGGGAAGGTGGTGCTGAGATGGACTGCGGGGGCAGTTGGACATATGAAATATGTaagaaatatatgaaatatttgaTAAAGTAAGAAATAATGGCAACATGTCCAGtaatataaaacagtttatttatatttattacgatgtttaaatgtatatccattgtagttgtttttttattcttgaataaaaatcaaatgaaaagcg

Function

NR:

description
PREDICTED: E3 ubiquitin-protein ligase RNF169

GO: NA

KEGG:

id description
ko04660 T cell receptor signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU18490 True 1254 lncRNA 0.62 1 26741085 26742338

Neighbor

gene id symbol gene type direction distance location
AMCG00016649 NA coding downstream 8995 26721787 ~ 26732090 (-)
AMCG00016642 NA coding downstream 76784 26662086 ~ 26664301 (-)
AMCG00016645 NA coding downstream 80345 26655588 ~ 26660740 (-)
AMCG00016634 NA coding downstream 294265 26442159 ~ 26446820 (-)
AMCG00016630 eif1b,LOC105888686,LOC107549864,LOC103043673 coding downstream 359356 26380048 ~ 26381729 (-)
AMCG00016648 NA coding upstream 1246 26743584 ~ 26749062 (-)
AMCG00016651 tbkbp1 coding upstream 74470 26816808 ~ 26822326 (-)
AMCG00016653 NA coding upstream 90856 26833194 ~ 26839113 (-)
AMCG00016652 NA coding upstream 130557 26872895 ~ 26886881 (-)
AMCG00016657 NA coding upstream 145996 26888334 ~ 26891932 (-)
G14832 NA non-coding downstream 218038 26522804 ~ 26523047 (-)
G14818 NA non-coding downstream 272986 26430455 ~ 26468099 (-)
G14775 NA non-coding downstream 315835 26425032 ~ 26425250 (-)
G14765 NA non-coding downstream 345660 26394932 ~ 26395425 (-)
G14723 NA non-coding downstream 437626 26275177 ~ 26303459 (-)
G14943 nfe2l1,nfe2l1b,LOC107565927 non-coding upstream 236820 26979158 ~ 26983486 (-)
G14999 NA non-coding upstream 501628 27243966 ~ 27245247 (-)
G15001 hoxb5a,LOC104941372,LOC103365501,LOC108278507,LOC108413114 non-coding upstream 521375 27263713 ~ 27265603 (-)
G15016 hoxb9 non-coding upstream 553747 27296085 ~ 27308958 (-)
G15066 NA non-coding upstream 652781 27395119 ~ 27398583 (-)
AMCG00016644 NA other downstream 97592 26626707 ~ 26643493 (-)
AMCG00016643 NA other downstream 148785 26582526 ~ 26592300 (-)
G14843 NA other downstream 169444 26568669 ~ 26571641 (-)
G14816 LOC108438405,LOC108438407,LOC107666325,LOC107563033,LOC107666324,LOC107753907 other downstream 220688 26427339 ~ 26520397 (-)
AMCG00016623 NA other downstream 499695 26239082 ~ 26241390 (-)
AMCG00016662 cbx1,cbx1b,LOC108279860 other upstream 252835 26995173 ~ 27003707 (-)
AMCG00016671 hoxb6ab,hoxb6,hoxb6a,LOC105013254,LOC103045875,LOC107582892 other upstream 523549 27265887 ~ 27279334 (-)
G15026 NA other upstream 627252 27369590 ~ 27370139 (-)
G15067 NA other upstream 659338 27401676 ~ 27403922 (-)
G15076 NA other upstream 682555 27424893 ~ 27428651 (-)

Expression


Co-expression Network