G15067


Basic Information

Item Value
gene id G15067
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 27401676 ~ 27403922 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU18738
TGTTTTGAAACCAAGCCATTTATTGCACAGTGTGACACACAAGGAACAGAACAGAGAATACACATTCCAGAATTCATAATTACAATGTGGAATTATAACAGCAGTGATATACCACAGAGTAGAATTTTCAAAGCTGATTGCGTTTATATTCAAGTTCCTGAACCCTATTGCAGTCACctaatattttccttaattaaaCCGGATGTAATGAGAACTGACACGCAAATCTGGAAATAATAAACGTCAAACAACCGGTGAGGAGCGTGCTGCGGCGCAGGGGGCAGGCTGCACACGCCTGACCCATCACAGTGTCAGGTTGTTCTACACGAAGTTCATCAATTTACATTATGATTAAAACAGTTTCTGCTTCATCTAGGATACCAGCAAAGATCAATATAATTCAGCCGCCGACAGAGACAGTGCAGCGAAGAGCCTCGAGCTGAAGGGAGCTGTGGCACGCCGCTCACAGCCGCGCACAGTGATTATGTGTAATATGCAGGCAACAAGAAGCCGAGTACGGAGAGCAGCAGACTCCAACGCCACAGCCTGGCCCTTTCTTGTAGCTCACACCAGTGCGCAGGGGGCTAGTCCCCGTGACTGTACACGTGCTCCTCGAACTGCTGCTGGGTCATGGGGTCACACAGCAGGCTGCAGTACGGGCACACCTTGTGGCTCTGCTCATGAGTGTCCAGCTCTGTTATGCTGATGCCGGGGAACAGCTCTCTGCAGAACTGGCACTGTCTCACCGCCTCCTTggaagagacacacagacacagacacagattagTACGTGGTCCTAGAGAGGACGGGGTGAGCACTGCCGCCTAGTGGCTGACTCTGAATGGCACCATTGAGCCCCCTGCCTGCGTCTTCACACCCCATTTCAGCTTCAGAGCGGCGAAGGAGCAGAGACGCAGGCTCTCGAACGGCCCTCTGCATCCACCGCTCACAGGAGCTCCTTCATGGACCCTCTGCCCTGTGTCGAGCTGTGGCTGTCAAAATGGCTGCCAATTTCAGACTATGCTGAACACTTGGCGTTCTTGTGTACACTGAAGTGGAAAGCGCATCAAATTTAAACAATGCTATTCAGCGGCACTAtacattattatgcaaatatttattttcactaagACTGCCgttatttttggtgttttttgtgGCAATTATTACCcgttacaaaatgtatgtatacgtATGCTATCTAAACGTGTACGATATTATATTTTCAGGGTTTCACGATGGATTCTTATAAATATGGAAACAAATCCTGTTACTTTGGATcacataaatgaatatataacaacaacaaccacaataataataacaatatgtgCTTACCTGTGGTTCTGCAGGTGGCGCACCTAAGGGAAAAAATTGGTAAAATCGTTTTTTTTGTCGCCTGTTAcgtgtcacacacacatacacacacacgcgcgcacgAACACGGAGAGCAGTGCAGGCAGTGTGGTTTTACCCGCAGTGTTGAAGGGATCACTGTAGCGGAGATCAGGGCTTTCATACAGGCCGGTCGTGGGCACAGGGGGGATGCTGTACGGGTTGGAGTACAGCAGGGAGATGCTGGGCTGGGGGGAGGGCTGGCGAGCAGACATCTGCTGCCGCAGTCTCTTCCTGCTCCCTCTGCGCGCGCAGCTCCCCCTGCAGCTCCCGCAGCTGCTGCTCCATCTGCTCCTTCTGCAcctgcagctcctgcagctGCCTGGACAGGCCCTCGT

Function

NR:

description
PREDICTED: nuclear receptor ROR-beta-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18738 True 1733 TUCP 0.48 3 27401676 27403922

Neighbor

gene id symbol gene type direction distance location
AMCG00016675 ttll6,LOC107582749,LOC107727303,LOC107666932 coding downstream 20588 27375965 ~ 27381088 (-)
AMCG00016670 LOC106579309 coding downstream 25976 27370979 ~ 27375700 (-)
AMCG00016669 hoxb13aa,hoxb13ab,hoxb13 coding downstream 62083 27338007 ~ 27339593 (-)
AMCG00016672 hoxb9ab,hoxb9,hoxb9a,LOC106600835 coding downstream 88503 27299603 ~ 27313173 (-)
AMCG00016673 hoxb8,hoxb8ab,hoxb8aa coding downstream 110815 27286874 ~ 27290861 (-)
AMCG00016681 snf8,LOC107734219,LOC107692042,LOC107554070,LOC107584075,LOC107660854 coding upstream 26180 27430102 ~ 27433860 (-)
AMCG00016688 nr1d1,LOC102302421 coding upstream 105723 27509645 ~ 27516973 (-)
AMCG00016692 NA coding upstream 239717 27643639 ~ 27650849 (-)
AMCG00016693 LOC107388104 coding upstream 251826 27655748 ~ 27669412 (-)
AMCG00016694 LOC105013104 coding upstream 297090 27701012 ~ 27707529 (-)
G15066 NA non-coding downstream 3093 27395119 ~ 27398583 (-)
G15016 hoxb9 non-coding downstream 92718 27296085 ~ 27308958 (-)
G15001 hoxb5a,LOC104941372,LOC103365501,LOC108278507,LOC108413114 non-coding downstream 136073 27263713 ~ 27265603 (-)
G14999 NA non-coding downstream 156429 27243966 ~ 27245247 (-)
G14943 nfe2l1,nfe2l1b,LOC107565927 non-coding downstream 418190 26979158 ~ 26983486 (-)
G15071 NA non-coding upstream 9078 27413000 ~ 27413229 (-)
G15073 NA non-coding upstream 11731 27415653 ~ 27415892 (-)
G15074 NA non-coding upstream 12327 27416249 ~ 27416539 (-)
G15075 NA non-coding upstream 20632 27424554 ~ 27424821 (-)
G15079 NA non-coding upstream 131403 27535325 ~ 27541840 (-)
G15026 NA other downstream 31537 27369590 ~ 27370139 (-)
AMCG00016671 hoxb6ab,hoxb6,hoxb6a,LOC105013254,LOC103045875,LOC107582892 other downstream 122342 27265887 ~ 27279334 (-)
AMCG00016662 cbx1,cbx1b,LOC108279860 other downstream 397969 26995173 ~ 27003707 (-)
AMCG00016644 NA other downstream 758183 26626707 ~ 26643493 (-)
AMCG00016643 NA other downstream 809376 26582526 ~ 26592300 (-)
G15076 NA other upstream 20971 27424893 ~ 27428651 (-)
AMCG00016712 NA other upstream 726090 28130012 ~ 28157200 (-)
AMCG00016732 NA other upstream 1377550 28781472 ~ 28785507 (-)
AMCG00016740 ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 other upstream 1797950 29201872 ~ 29225587 (-)
G15706 NA other upstream 2797537 30201459 ~ 30202351 (-)

Expression


Co-expression Network