G15787


Basic Information

Item Value
gene id G15787
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 30526292 ~ 30529500 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU19613
ACCAGTGTATTTGTAGTTCAGTCATTAAAGAagaccatttttctttttattttgttaaaaacaaagtttactTGCCCCAAATAGTAAATCACTTGAAATAAAGAACACCTTCAGCTATAAAACATCATAAAGATTTTGTTTGTCATGAGCAGTACAAATctgcaaagcttttttttttttttttttttttttttttaattaaaaagaacactGTAGAAAGCTTACTGGTGACAGTTTTccaatttgtaaaaaaaaaaacttgtgtttAAAGATCATATACACATGGTTctgatataaaaaacaaaaaacaaggatGCAGGAAAATTAGTCTTAATCAGAAAATATCAACCCTACTGAAACCATTTGAAGCATTTTATGGAATCTggcaataaaaaacaagaatcaTTCTGAACAGGAGGCCTGCTTCCCTAATTCGAATGCAGTTAGATCATAGACTCCAACACCTCTTAATGGCAAAGCAATATTCAGGATACCCTTGTTGTGGAAATTGATGTGGCATTAGCCAACTtcaaaacatggaaaacaacCTTCTCTACAGAGAGCTCTTGAAGTAAGATTGAATCATGTAAAACCCTAACAATTTTTTACATGATTTACTGACTTTTTGATGTCAATAGAAAATCGTCCACTGCAGCTAGGTCTCTCAGTCTGCTAAGTAAAACCGAGAGCTTGagaagcaaaaaaacatttattttgtctgtatttggCCTACATCACACATTGCACTAACCATGGCTTGTTTCTTCCTCAtattcagatataaaaaaacaaaactgtgtgtTGATCAGAGGCCTGTTCAAATTACTGCATTCACTTAAGACTGCAGTCCGTGGTCCCCCACACCCTCCTAATAATCCTACAGTACAAATGTGTCCATCGCTTCCTGCCATCAGGGAATCAGGCAAGAAATACCCCTATTATGTACACGCACTAAGAAAGGATAATTTCCCTTTCAAAGAGCATCACTGGGTGGCATGTTTTGAAAATTGTTCATTACAAAGAGCTTTAAaaaaaggtgtgtgtggggggggagagggcTCCAGTTGTGatggtttattttcatcataagttcttgtaaaactaaaatcataCAGTTGAAATTCTTTACAGGAGTTTGCGTGTTTTCGAAAAGTATATCTAGAAAATCCTCCAAGCTGGGGTTTGACAAAAAAACGTGCacgaacaaataaaaaaaaaagctgaagagGAGCTCTGGGGGCAGACAGTCAAAGTAGCGgatgtaaaaataagaaaaacctCAGACCTGTCGCAGCAGAAGCATAGCTGTCCCTAGAGGCCAGAATCTGAATGTCTGTTTAGAGAGGCATGAGGGAGCGAGGGGattggaggagggagaggggtggCTTCTCTGCACAAAAAGCTTTTTcgcaagtcttttttttttggctcacAAAATGTTCCctcatgggggtgggggggagtggggtGCTGATATGGCAGCGTGTACGGGGGGCTCTGATCCCCGCTCTCTTGGCTCTGTGCTGCTCACAGCCGGGAGGGATCGGTTTGCTTTTTGTTGGTTTGATGGGAAACATCAAAGGGATCCCCGGGATCAGTCCGAGTCCGACTCGGAAGACTCCTCTGAGCTGGacgagctgctgctgctgctctccgACTTGTTCTCCTTGTCGTCTGCCTCTTCCtcgtcatcctcctcctcttcctcattcTGAATGGGAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19613 True 1724 TUCP 0.41 2 30526292 30529500

Neighbor

gene id symbol gene type direction distance location
AMCG00016794 NA coding downstream 58488 30465157 ~ 30467804 (-)
AMCG00016780 NA coding downstream 284723 30236974 ~ 30241569 (-)
AMCG00016779 gosr2,LOC107654523,LOC107721531,LOC107674598 coding downstream 302883 30216244 ~ 30223409 (-)
AMCG00016775 NA coding downstream 352004 30161793 ~ 30174288 (-)
AMCG00016773 NA coding downstream 386601 30123851 ~ 30139691 (-)
AMCG00016792 NA coding upstream 21628 30551128 ~ 30557792 (-)
AMCG00016793 NA coding upstream 28756 30558256 ~ 30563594 (-)
AMCG00016801 psmc5,LOC107753303,LOC107745657,LOC106579096 coding upstream 473606 31003106 ~ 31008426 (-)
AMCG00016800 NA coding upstream 483063 31012563 ~ 31015970 (-)
AMCG00016802 LOC105013322 coding upstream 530851 31060351 ~ 31060686 (-)
G15746 NA non-coding downstream 94294 30429929 ~ 30431998 (-)
G15716 NA non-coding downstream 289425 30233548 ~ 30236867 (-)
G15711 NA non-coding downstream 317755 30207687 ~ 30208537 (-)
G15708 NA non-coding downstream 321177 30204822 ~ 30205115 (-)
G15690 NA non-coding downstream 413008 30109453 ~ 30113284 (-)
G15845 NA non-coding upstream 469134 30998634 ~ 31002128 (-)
G15854 NA non-coding upstream 503570 31033070 ~ 31033320 (-)
G15864 NA non-coding upstream 573879 31103379 ~ 31106792 (-)
G15890 NA non-coding upstream 642685 31172185 ~ 31176602 (-)
G15927 NA non-coding upstream 840580 31370080 ~ 31379449 (-)
G15706 NA other downstream 323941 30201459 ~ 30202351 (-)
AMCG00016740 ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 other downstream 1300705 29201872 ~ 29225587 (-)
AMCG00016732 NA other downstream 1740785 28781472 ~ 28785507 (-)
AMCG00016712 NA other downstream 2369092 28130012 ~ 28157200 (-)
G15076 NA other downstream 3097641 27424893 ~ 27428651 (-)
AMCG00016815 NA other upstream 851047 31380547 ~ 31388268 (-)
AMCG00016847 NA other upstream 1732049 32261549 ~ 32267968 (-)
G16247 NA other upstream 1893558 32423058 ~ 32423438 (-)
AMCG00016859 NA other upstream 1968007 32497507 ~ 32507319 (-)
G16356 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 other upstream 2646576 33176076 ~ 33178883 (-)

Expression


Co-expression Network