G16043


Basic Information

Item Value
gene id G16043
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 31718900 ~ 31720036 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU19936
AATTACAGGAGAAAATTCAGCAAATGTCTGTTCTGTACATGTGGTGGGAGGCGGTAGTGGGGGTATATATTTCACCTCTCTCTTGCCACAACCTTCTTTATAAAGTAGATGCTTTATAAACTCAGCGTTCACTAGCAGCTTGGCCATCCTGCACACCAACGATGGAGCTACAGAACACATGCAGTGGACTGCAGAAAACTGCAGAAGATGATATATACACAACTTTACACCAATCCACAGCTGCTGTGAAGAGCATGGACAGCACCTTATGTTACTATCGAGTGGCTGTTTTGCTGCTCTCCATCCTGTGTGGTCTCCTACTGGGTGCCACTACAGTGCTAGGAGCTCTGTaTGTATTCCAGTCTGATTTGATTAGTGAATTGCAGAGGGAAAAACAGGACTGGATATCATCCACATTCCCCTGTTCTAAAG

Function

GO: NA

KEGG:

id description
ko03010 Ribosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU19936 True 432 lncRNA 0.55 3 31718900 31720036

Neighbor

gene id symbol gene type direction distance location
AMCG00016824 NA coding downstream 44404 31658248 ~ 31674496 (-)
AMCG00016823 nmt1,LOC102778525 coding downstream 64967 31643856 ~ 31653933 (-)
AMCG00016816 NA coding downstream 314956 31400817 ~ 31403944 (-)
AMCG00016811 NA coding downstream 381620 31336445 ~ 31337280 (-)
AMCG00016812 NA coding downstream 403512 31292282 ~ 31315388 (-)
AMCG00016831 NA coding upstream 35499 31755535 ~ 31762700 (-)
AMCG00016833 NA coding upstream 57376 31777412 ~ 31801252 (-)
AMCG00016835 NA coding upstream 83001 31803037 ~ 31818127 (-)
AMCG00016834 NA coding upstream 119795 31839831 ~ 31844052 (-)
AMCG00016838 NA coding upstream 124426 31844462 ~ 31852119 (-)
G16026 NA non-coding downstream 19500 31699136 ~ 31699400 (-)
G16024 NA non-coding downstream 21292 31693816 ~ 31697608 (-)
G16004 NA non-coding downstream 103687 31604606 ~ 31615213 (-)
G15985 NA non-coding downstream 190279 31528050 ~ 31528621 (-)
G15982 NA non-coding downstream 214352 31504079 ~ 31504548 (-)
G16069 NA non-coding upstream 49694 31769730 ~ 31771274 (-)
G16154 NA non-coding upstream 485687 32205723 ~ 32206877 (-)
G16153 NA non-coding upstream 486926 32206962 ~ 32208117 (-)
G16244 NA non-coding upstream 673106 32393142 ~ 32393380 (-)
G16245 NA non-coding upstream 696155 32416191 ~ 32416444 (-)
AMCG00016815 NA other downstream 330632 31380547 ~ 31388268 (-)
G15787 NA other downstream 1189400 30526292 ~ 30529500 (-)
G15706 NA other downstream 1516549 30201459 ~ 30202351 (-)
AMCG00016740 ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 other downstream 2493313 29201872 ~ 29225587 (-)
AMCG00016732 NA other downstream 2933393 28781472 ~ 28785507 (-)
AMCG00016847 NA other upstream 541513 32261549 ~ 32267968 (-)
G16247 NA other upstream 703022 32423058 ~ 32423438 (-)
AMCG00016859 NA other upstream 777471 32497507 ~ 32507319 (-)
G16356 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 other upstream 1456040 33176076 ~ 33178883 (-)
AMCG00016889 LOC107570748,LOC106906011 other upstream 1671753 33391789 ~ 33434651 (-)

Expression


Co-expression Network