G16323


Basic Information

Item Value
gene id G16323
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 32981779 ~ 32982330 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU20283
TTCTGAAGCAGAGTCCTTTTCCCTGTACCCTACAAGCTTCTGGATGTTGAAGCCTCTCTGTGATGCCTCTACACTGCTGGGTCGAGGGTGTTAATGATGGCTGCTGTCTCAGGGCTCTATACCGTGTCAGaattttTTATGAGTTTCGTTGACTGAAGTGCAACTGTCTAttgttattgtaaagtgttcCGGGATGTGCTGACACGAAAGGTgatataaacaataaacatttattattattattattattattattattattattatta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20283 True 269 lncRNA 0.38 2 32981779 32982330

Neighbor

gene id symbol gene type direction distance location
AMCG00016866 ace,LOC107598651 coding upstream 60552 32895759 ~ 32921227 (+)
AMCG00016865 NA coding upstream 125478 32810085 ~ 32856301 (+)
AMCG00016863 NA coding upstream 204307 32773075 ~ 32777472 (+)
AMCG00016861 NA coding upstream 374397 32590767 ~ 32607382 (+)
AMCG00016855 NA coding upstream 483271 32497882 ~ 32498508 (+)
AMCG00016872 LOC101070426,LOC103367899,LOC104923905 coding downstream 4250 32986580 ~ 32989958 (+)
AMCG00016873 NA coding downstream 30588 33012918 ~ 33021870 (+)
AMCG00016875 NA coding downstream 52972 33035302 ~ 33109567 (+)
AMCG00016874 NA coding downstream 166161 33148491 ~ 33151617 (+)
AMCG00016885 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 coding downstream 193941 33176271 ~ 33177932 (+)
G16290 NA non-coding upstream 122763 32857551 ~ 32859016 (+)
G16211 NA non-coding upstream 539194 32438254 ~ 32442585 (+)
G16169 NA non-coding upstream 719107 32261711 ~ 32262672 (+)
G16037 NA non-coding upstream 1226352 31755042 ~ 31755427 (+)
G15995 NA non-coding upstream 1337264 31615220 ~ 31644515 (+)
G16350 NA non-coding downstream 197375 33179705 ~ 33179940 (+)
G16351 NA non-coding downstream 197909 33180239 ~ 33180439 (+)
G16395 NA non-coding downstream 342764 33325094 ~ 33328342 (+)
G16512 NA non-coding downstream 668751 33651081 ~ 33651289 (+)
G16542 NA non-coding downstream 1010852 33993182 ~ 33995382 (+)
G16289 NA other upstream 124339 32856361 ~ 32857440 (+)
AMCG00016854 NA other upstream 478407 32499056 ~ 32503372 (+)
AMCG00016841 NA other upstream 721152 32251808 ~ 32260627 (+)
AMCG00016830 NA other upstream 1230666 31728556 ~ 31751113 (+)
AMCG00016829 NA other upstream 1250333 31701669 ~ 31731446 (+)
AMCG00016880 dcaf7,LOC100702343,LOC105030232,LOC105898766 other downstream 337814 33320144 ~ 33333746 (+)
AMCG00016898 NA other downstream 647682 33630012 ~ 33650080 (+)
AMCG00016901 NA other downstream 686263 33668593 ~ 33674361 (+)
G16546 NA other downstream 1065041 34047371 ~ 34047720 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other downstream 1110946 34093276 ~ 34099596 (+)

Expression


Co-expression Network