G16560


Basic Information

Item Value
gene id G16560
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 34100921 ~ 34101206 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU20568
AAACACTAGTCTATATCTAAACCCTTCTCAATTCATAACAGATCACAGACACACCAATGGCCCACACAGAACTCCCTAAAGAAAACAGTGGACAGTGAAAGAatcactttattaaaataataataataataataatNNNNNNNNNNataataataataataataatgtcttacCGCTTTTCGTTGTCCAGCTCATTTACCTCACGCTTCTTGGACAGAGCTTTcagctttggaaaaaatccCCTAGACTTGTGCAGCTTCCTCTGATCTGTCTCTCTCGGGTCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20568 True 286 lncRNA 0.36 1 34100921 34101206

Neighbor

gene id symbol gene type direction distance location
AMCG00016908 NA coding downstream 92121 34000597 ~ 34008800 (-)
AMCG00016907 nxph3,LOC105012985,LOC105898539,LOC107092790,LOC106601594 coding downstream 220243 33877103 ~ 33880678 (-)
AMCG00016904 LOC107583088 coding downstream 504679 33582724 ~ 33596242 (-)
AMCG00016892 ddx42 coding downstream 525625 33554101 ~ 33575296 (-)
AMCG00016895 NA coding downstream 580847 33513627 ~ 33520074 (-)
AMCG00016911 LOC105028465,LOC108426558,LOC107655803,LOC107557242 coding upstream 113693 34214899 ~ 34263010 (-)
AMCG00016931 NA coding upstream 990247 35091453 ~ 35096502 (-)
AMCG00016936 NA coding upstream 1134386 35235592 ~ 35245651 (-)
AMCG00016937 NA coding upstream 1172717 35273923 ~ 35312713 (-)
AMCG00016940 lasp1,LOC102776212 coding upstream 1303424 35404630 ~ 35410252 (-)
G16556 NA non-coding downstream 698 34096312 ~ 34100223 (-)
G16554 NA non-coding downstream 105661 33993190 ~ 33995260 (-)
G16533 NA non-coding downstream 294499 33771708 ~ 33806422 (-)
G16522 NA non-coding downstream 427364 33668596 ~ 33673557 (-)
G16519 NA non-coding downstream 438638 33659633 ~ 33662283 (-)
G16561 NA non-coding upstream 81 34101287 ~ 34101572 (-)
G16567 NA non-coding upstream 90266 34191472 ~ 34194310 (-)
G16605 ptrfb,LOC105935706,LOC101465061,LOC102209316,LOC102787483,LOC103482185,LOC103142478 non-coding upstream 195053 34296259 ~ 34300803 (-)
G16635 NA non-coding upstream 371130 34472336 ~ 34473547 (-)
G16650 LOC106601024,LOC106607294,LOC103359488 non-coding upstream 457373 34558579 ~ 34561068 (-)
AMCG00016891 limd2,LOC107674139,LOC107658411 other downstream 587342 33488725 ~ 33513579 (-)
AMCG00016889 LOC107570748,LOC106906011 other downstream 666270 33391789 ~ 33434651 (-)
G16356 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 other downstream 922038 33176076 ~ 33178883 (-)
AMCG00016859 NA other downstream 1593602 32497507 ~ 32507319 (-)
G16247 NA other downstream 1677483 32423058 ~ 32423438 (-)
G16563 NA other upstream 5484 34106690 ~ 34107941 (-)
AMCG00016938 NA other upstream 1294786 35395992 ~ 35399030 (-)
G17032 NA other upstream 3656951 37758157 ~ 37758471 (-)
AMCG00016959 NA other upstream 3774044 37875250 ~ 38058939 (-)
G17421 NA other upstream 7115445 41216651 ~ 41217231 (-)

Expression


Co-expression Network