G16788


Basic Information

Item Value
gene id G16788
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 35351577 ~ 35351920 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU20848
TCGGACAGCTGGGGTCGTGCGGCGAAACAAAACGGGGGGTACGTGACTGAGCAGAGGAGTTGCGACGAGGAAAAGAAAAGTCACACGAACAAGAGTAGATTTCAACGATTCACACGCATCATGATAATCCAGTCTGCGTCTTCTTGGTTTCCTTCACGATCGCCCCTTTTTCCGTTGCTTGGCTGTTGATTGCACCCCCCTCCTGCGCCGCCGGAGCGCCTGTGTGTAAATCCCCGTCCCGGCCGGCCCGCTGCTCTGACTGAGGCTCGCTAGGGCGGGCGCTCGGCGTCAATCTGGCCGCTGTGTGAGAGCTCGTCACAGCCTGTCCGTTCGCCACCAACCGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20848 True 344 lncRNA 0.60 1 35351577 35351920

Neighbor

gene id symbol gene type direction distance location
AMCG00016935 NA coding upstream 91097 35247507 ~ 35260480 (+)
AMCG00016933 NA coding upstream 119048 35220562 ~ 35232529 (+)
AMCG00016932 klhl11,LOC107097235,LOC103373141 coding upstream 138964 35205880 ~ 35212613 (+)
AMCG00016929 NA coding upstream 209788 35137549 ~ 35141789 (+)
AMCG00016930 NA coding upstream 220572 35121947 ~ 35131005 (+)
AMCG00016941 NA coding downstream 201302 35553222 ~ 35555196 (+)
AMCG00016943 NA coding downstream 271430 35623350 ~ 35623650 (+)
AMCG00016945 mtmr14 coding downstream 423156 35775076 ~ 35785159 (+)
AMCG00016946 NA coding downstream 451228 35803148 ~ 35848748 (+)
AMCG00016948 NA coding downstream 750446 36102366 ~ 36202202 (+)
G16784 NA non-coding upstream 44852 35306489 ~ 35306725 (+)
G16779 arhgap23,LOC103363845 non-coding upstream 68817 35282171 ~ 35282760 (+)
G16778 NA non-coding upstream 72509 35278829 ~ 35279068 (+)
G16775 NA non-coding upstream 75758 35270633 ~ 35275819 (+)
G16771 NA non-coding upstream 86509 35263052 ~ 35265068 (+)
G16806 NA non-coding downstream 29577 35381497 ~ 35381783 (+)
G16814 NA non-coding downstream 47908 35399828 ~ 35449171 (+)
G16863 NA non-coding downstream 546287 35898207 ~ 35898516 (+)
G16969 NA non-coding downstream 1329419 36681339 ~ 36681552 (+)
G16984 NA non-coding downstream 1621144 36973064 ~ 36973283 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other upstream 147345 35158597 ~ 35204232 (+)
G16550 NA other upstream 1250714 34100315 ~ 34100863 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other upstream 1251981 34093276 ~ 34099596 (+)
G16546 NA other upstream 1303857 34047371 ~ 34047720 (+)
AMCG00016901 NA other upstream 1677216 33668593 ~ 33674361 (+)
G17193 NA other downstream 3144131 38496051 ~ 38503632 (+)
AMCG00016979 NA other downstream 3887153 39239073 ~ 39254490 (+)
G17697 NA other downstream 7039377 42391297 ~ 42397787 (+)
AMCG00017078 LOC106565757 other downstream 8774294 44126214 ~ 44137931 (+)
G18192 NA other downstream 9302732 44654652 ~ 44656098 (+)

Expression


Co-expression Network