G16790


Basic Information

Item Value
gene id G16790
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 35270117 ~ 35270539 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU20851
atatatagcattttttttttactgtttacaTTGGTGCATCCCATGCACAATCATTTCCTTTACATTGTTACTTGAAATGTTTCcctttctatgttttttttattttatttttatttttgttttatatacagtatatatatattttttgtaagaaaAGAAGTACTTTTATTGTGATCTGAATTCTCGGGGTGTTCCTGTGTAAAGAGACTGTCCTGGGTGAGCCCCTGTTCACGTGGCTTCAGCTGATTCTTGTGTTTCCTGACAAATATTCTGACTGATGTGGATTAAATCTTCCTTAGACAAAACAACCACGTGCATTTCACATTCGCACTTCTTGTGGATAGGTGGCGGTGCATGTCAGTAGAAGTAGCCCATTCTAGGGCCATGTTAAAACTGGACAGGCTGTGAAATCACATTActgtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20851 True 423 lncRNA 0.36 1 35270117 35270539

Neighbor

gene id symbol gene type direction distance location
AMCG00016936 NA coding downstream 24466 35235592 ~ 35245651 (-)
AMCG00016931 NA coding downstream 173615 35091453 ~ 35096502 (-)
AMCG00016911 LOC105028465,LOC108426558,LOC107655803,LOC107557242 coding downstream 1007107 34214899 ~ 34263010 (-)
AMCG00016908 NA coding downstream 1261317 34000597 ~ 34008800 (-)
AMCG00016907 nxph3,LOC105012985,LOC105898539,LOC107092790,LOC106601594 coding downstream 1389439 33877103 ~ 33880678 (-)
AMCG00016937 NA coding upstream 3384 35273923 ~ 35312713 (-)
AMCG00016940 lasp1,LOC102776212 coding upstream 134091 35404630 ~ 35410252 (-)
AMCG00016939 NA coding upstream 141040 35411579 ~ 35420041 (-)
AMCG00016942 NA coding upstream 186658 35457197 ~ 35484896 (-)
AMCG00016944 lhfpl4,LOC107716887 coding upstream 453994 35724533 ~ 35725033 (-)
G16761 NA non-coding downstream 47579 35216103 ~ 35222538 (-)
G16712 NA non-coding downstream 151211 35116112 ~ 35118906 (-)
G16693 NA non-coding downstream 493069 34775825 ~ 34777048 (-)
G16679 NA non-coding downstream 513112 34754171 ~ 34757005 (-)
G16669 NA non-coding downstream 533568 34736339 ~ 34736549 (-)
G16804 NA non-coding upstream 91584 35362123 ~ 35362326 (-)
G16858 NA non-coding upstream 414164 35684703 ~ 35733304 (-)
G16893 NA non-coding upstream 572391 35842930 ~ 35912085 (-)
G16927 NA non-coding upstream 1081414 36351953 ~ 36352178 (-)
G16979 NA non-coding upstream 1438612 36709151 ~ 36709355 (-)
G16563 NA other downstream 1162176 34106690 ~ 34107941 (-)
AMCG00016891 limd2,LOC107674139,LOC107658411 other downstream 1756538 33488725 ~ 33513579 (-)
AMCG00016889 LOC107570748,LOC106906011 other downstream 1835466 33391789 ~ 33434651 (-)
G16356 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 other downstream 2091234 33176076 ~ 33178883 (-)
AMCG00016859 NA other downstream 2762798 32497507 ~ 32507319 (-)
AMCG00016938 NA other upstream 125453 35395992 ~ 35399030 (-)
G17032 NA other upstream 2487618 37758157 ~ 37758471 (-)
AMCG00016959 NA other upstream 2604711 37875250 ~ 38058939 (-)
G17421 NA other upstream 5946112 41216651 ~ 41217231 (-)
AMCG00017014 NA other upstream 6666387 41936926 ~ 41938563 (-)

Expression


Co-expression Network