Gene
RNA
| Item | Value |
|---|---|
| gene id | G16893 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 35842930 ~ 35912085 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU20963 | True | 235 | lncRNA | 0.31 | 2 | 35842930 | 35912085 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016944 | lhfpl4,LOC107716887 | coding | downstream | 117897 | 35724533 ~ 35725033 (-) |
| AMCG00016942 | NA | coding | downstream | 358034 | 35457197 ~ 35484896 (-) |
| AMCG00016939 | NA | coding | downstream | 422889 | 35411579 ~ 35420041 (-) |
| AMCG00016940 | lasp1,LOC102776212 | coding | downstream | 432678 | 35404630 ~ 35410252 (-) |
| AMCG00016937 | NA | coding | downstream | 530217 | 35273923 ~ 35312713 (-) |
| AMCG00016952 | NA | coding | upstream | 340290 | 36252375 ~ 36279677 (-) |
| AMCG00016953 | LOC107715024,LOC107664194,LOC102787184 | coding | upstream | 654196 | 36566281 ~ 36570011 (-) |
| AMCG00016954 | txnrd3,LOC100702976,LOC106511133 | coding | upstream | 770665 | 36682750 ~ 36701982 (-) |
| AMCG00016955 | plxna1,LOC106572368 | coding | upstream | 1506342 | 37418427 ~ 37499161 (-) |
| AMCG00016957 | plxna1,LOC106572368 | coding | upstream | 1623788 | 37535873 ~ 37569505 (-) |
| G16858 | NA | non-coding | downstream | 109626 | 35684703 ~ 35733304 (-) |
| G16804 | NA | non-coding | downstream | 480604 | 35362123 ~ 35362326 (-) |
| G16790 | NA | non-coding | downstream | 572391 | 35270117 ~ 35270539 (-) |
| G16761 | NA | non-coding | downstream | 620392 | 35216103 ~ 35222538 (-) |
| G16712 | NA | non-coding | downstream | 724024 | 35116112 ~ 35118906 (-) |
| G16927 | NA | non-coding | upstream | 439868 | 36351953 ~ 36352178 (-) |
| G16979 | NA | non-coding | upstream | 797066 | 36709151 ~ 36709355 (-) |
| G16986 | NA | non-coding | upstream | 1261796 | 37173881 ~ 37174163 (-) |
| G16988 | NA | non-coding | upstream | 1283677 | 37195762 ~ 37196078 (-) |
| G16992 | NA | non-coding | upstream | 1329674 | 37241759 ~ 37337110 (-) |
| AMCG00016938 | NA | other | downstream | 443900 | 35395992 ~ 35399030 (-) |
| G16563 | NA | other | downstream | 1734989 | 34106690 ~ 34107941 (-) |
| AMCG00016891 | limd2,LOC107674139,LOC107658411 | other | downstream | 2329351 | 33488725 ~ 33513579 (-) |
| AMCG00016889 | LOC107570748,LOC106906011 | other | downstream | 2408279 | 33391789 ~ 33434651 (-) |
| G16356 | fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 | other | downstream | 2664047 | 33176076 ~ 33178883 (-) |
| G17032 | NA | other | upstream | 1846072 | 37758157 ~ 37758471 (-) |
| AMCG00016959 | NA | other | upstream | 1963165 | 37875250 ~ 38058939 (-) |
| G17421 | NA | other | upstream | 5304566 | 41216651 ~ 41217231 (-) |
| AMCG00017014 | NA | other | upstream | 6024841 | 41936926 ~ 41938563 (-) |
| G17842 | NA | other | upstream | 6896626 | 42808711 ~ 42864616 (-) |
