Gene
RNA
| Item | Value |
|---|---|
| gene id | G17033 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 37815577 ~ 37816017 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU21120 | True | 441 | lncRNA | 0.35 | 1 | 37815577 | 37816017 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016956 | plxna1,LOC104944641 | coding | downstream | 127342 | 37687015 ~ 37688235 (-) |
| AMCG00016957 | plxna1,LOC106572368 | coding | downstream | 246072 | 37535873 ~ 37569505 (-) |
| AMCG00016955 | plxna1,LOC106572368 | coding | downstream | 316416 | 37418427 ~ 37499161 (-) |
| AMCG00016954 | txnrd3,LOC100702976,LOC106511133 | coding | downstream | 1113595 | 36682750 ~ 36701982 (-) |
| AMCG00016953 | LOC107715024,LOC107664194,LOC102787184 | coding | downstream | 1245566 | 36566281 ~ 36570011 (-) |
| AMCG00016958 | tpra1 | coding | upstream | 246056 | 38062073 ~ 38071943 (-) |
| AMCG00016964 | NA | coding | upstream | 276032 | 38092049 ~ 38114746 (-) |
| AMCG00016963 | LOC108427613,LOC103025619,LOC104955611,LOC104930301,LOC103373509,LOC100704252 | coding | upstream | 325744 | 38141761 ~ 38146133 (-) |
| AMCG00016962 | NA | coding | upstream | 333488 | 38149505 ~ 38163660 (-) |
| AMCG00016961 | NA | coding | upstream | 355135 | 38171152 ~ 38174324 (-) |
| G17021 | NA | non-coding | downstream | 400767 | 37414114 ~ 37414810 (-) |
| G16992 | NA | non-coding | downstream | 478467 | 37241759 ~ 37337110 (-) |
| G16988 | NA | non-coding | downstream | 619499 | 37195762 ~ 37196078 (-) |
| G16986 | NA | non-coding | downstream | 641414 | 37173881 ~ 37174163 (-) |
| G16979 | NA | non-coding | downstream | 1106222 | 36709151 ~ 36709355 (-) |
| G17039 | NA | non-coding | upstream | 42307 | 37858324 ~ 37858524 (-) |
| G17094 | NA | non-coding | upstream | 273662 | 38089679 ~ 38117255 (-) |
| G17140 | NA | non-coding | upstream | 509233 | 38325250 ~ 38326037 (-) |
| G17148 | NA | non-coding | upstream | 523558 | 38339575 ~ 38339875 (-) |
| G17149 | NA | non-coding | upstream | 524366 | 38340383 ~ 38340835 (-) |
| G17032 | NA | other | downstream | 57106 | 37758157 ~ 37758471 (-) |
| AMCG00016938 | NA | other | downstream | 2416547 | 35395992 ~ 35399030 (-) |
| G16563 | NA | other | downstream | 3707636 | 34106690 ~ 34107941 (-) |
| AMCG00016891 | limd2,LOC107674139,LOC107658411 | other | downstream | 4301998 | 33488725 ~ 33513579 (-) |
| AMCG00016889 | LOC107570748,LOC106906011 | other | downstream | 4380926 | 33391789 ~ 33434651 (-) |
| AMCG00016959 | NA | other | upstream | 59233 | 37875250 ~ 38058939 (-) |
| G17421 | NA | other | upstream | 3400634 | 41216651 ~ 41217231 (-) |
| AMCG00017014 | NA | other | upstream | 4120909 | 41936926 ~ 41938563 (-) |
| G17842 | NA | other | upstream | 4992694 | 42808711 ~ 42864616 (-) |
| AMCG00017051 | NA | other | upstream | 5132974 | 42948991 ~ 42974433 (-) |
