Gene
RNA
| Item | Value |
|---|---|
| gene id | G17094 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 38089679 ~ 38117255 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0033692 | cellular polysaccharide biosynthetic process | biological_process |
| GO:0009103 | lipopolysaccharide biosynthetic process | biological_process |
| GO:0034637 | cellular carbohydrate biosynthetic process | biological_process |
| GO:0008653 | lipopolysaccharide metabolic process | biological_process |
| GO:0000271 | polysaccharide biosynthetic process | biological_process |
| GO:0016051 | carbohydrate biosynthetic process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU21193 | True | 1210 | lncRNA | 0.38 | 2 | 38089679 | 38117255 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016958 | tpra1 | coding | downstream | 17736 | 38062073 ~ 38071943 (-) |
| AMCG00016956 | plxna1,LOC104944641 | coding | downstream | 401444 | 37687015 ~ 37688235 (-) |
| AMCG00016957 | plxna1,LOC106572368 | coding | downstream | 520174 | 37535873 ~ 37569505 (-) |
| AMCG00016955 | plxna1,LOC106572368 | coding | downstream | 590518 | 37418427 ~ 37499161 (-) |
| AMCG00016954 | txnrd3,LOC100702976,LOC106511133 | coding | downstream | 1387697 | 36682750 ~ 36701982 (-) |
| AMCG00016963 | LOC108427613,LOC103025619,LOC104955611,LOC104930301,LOC103373509,LOC100704252 | coding | upstream | 24506 | 38141761 ~ 38146133 (-) |
| AMCG00016962 | NA | coding | upstream | 32250 | 38149505 ~ 38163660 (-) |
| AMCG00016961 | NA | coding | upstream | 53897 | 38171152 ~ 38174324 (-) |
| AMCG00016967 | NA | coding | upstream | 65047 | 38182302 ~ 38219837 (-) |
| AMCG00016968 | NA | coding | upstream | 243279 | 38360534 ~ 38371250 (-) |
| G17039 | NA | non-coding | downstream | 231155 | 37858324 ~ 37858524 (-) |
| G17033 | NA | non-coding | downstream | 273662 | 37815577 ~ 37816017 (-) |
| G17021 | NA | non-coding | downstream | 674869 | 37414114 ~ 37414810 (-) |
| G16992 | NA | non-coding | downstream | 752569 | 37241759 ~ 37337110 (-) |
| G16988 | NA | non-coding | downstream | 893601 | 37195762 ~ 37196078 (-) |
| G17140 | NA | non-coding | upstream | 207995 | 38325250 ~ 38326037 (-) |
| G17148 | NA | non-coding | upstream | 222320 | 38339575 ~ 38339875 (-) |
| G17149 | NA | non-coding | upstream | 223128 | 38340383 ~ 38340835 (-) |
| G17164 | NA | non-coding | upstream | 268566 | 38385821 ~ 38386161 (-) |
| G17166 | NA | non-coding | upstream | 274415 | 38391670 ~ 38392072 (-) |
| AMCG00016959 | NA | other | downstream | 30740 | 37875250 ~ 38058939 (-) |
| G17032 | NA | other | downstream | 331208 | 37758157 ~ 37758471 (-) |
| AMCG00016938 | NA | other | downstream | 2690649 | 35395992 ~ 35399030 (-) |
| G16563 | NA | other | downstream | 3981738 | 34106690 ~ 34107941 (-) |
| AMCG00016891 | limd2,LOC107674139,LOC107658411 | other | downstream | 4576100 | 33488725 ~ 33513579 (-) |
| G17421 | NA | other | upstream | 3099396 | 41216651 ~ 41217231 (-) |
| AMCG00017014 | NA | other | upstream | 3819671 | 41936926 ~ 41938563 (-) |
| G17842 | NA | other | upstream | 4691456 | 42808711 ~ 42864616 (-) |
| AMCG00017051 | NA | other | upstream | 4831736 | 42948991 ~ 42974433 (-) |
| AMCG00017061 | NA | other | upstream | 5162982 | 43280237 ~ 43286603 (-) |
