G17164


Basic Information

Item Value
gene id G17164
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 38385821 ~ 38386161 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU21281
CTCTCTGGAGcgatacacaaagcttaaattcatacatgggttacacaatcttgctgcaacaatgaCGTGAATATATTGGATATTAACACGGCACTGTCCCGCATCAATAGTTTAATAAGTGTGTTAGAGCAAGTGTGCTGAGCTATACAGGATgttgcattaaatacatttgggaATGCCACGTTCAGCTAcacagttatttattatgtatttcttagcagacacccttatccagggcggcTAGCAAAACATAAGTGCATTAAAGAAGTGCAATagtctaaaattacagatcaaaacatagcacaaattagatgttcaaaattacataactgtatattatt

Function

GO:

id name namespace
GO:0030031 cell projection assembly biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21281 True 341 lncRNA 0.36 1 38385821 38386161

Neighbor

gene id symbol gene type direction distance location
AMCG00016968 NA coding downstream 14571 38360534 ~ 38371250 (-)
AMCG00016967 NA coding downstream 165984 38182302 ~ 38219837 (-)
AMCG00016961 NA coding downstream 211497 38171152 ~ 38174324 (-)
AMCG00016962 NA coding downstream 222161 38149505 ~ 38163660 (-)
AMCG00016963 LOC108427613,LOC103025619,LOC104955611,LOC104930301,LOC103373509,LOC100704252 coding downstream 239688 38141761 ~ 38146133 (-)
AMCG00016969 NA coding upstream 119995 38506156 ~ 38513767 (-)
AMCG00016977 LOC108436697 coding upstream 435947 38822108 ~ 38893519 (-)
AMCG00016978 sec13,LOC107557974 coding upstream 832663 39218824 ~ 39237899 (-)
AMCG00016987 pcbp4,LOC108436686,LOC107677040,LOC107708490,LOC107567193 coding upstream 1441079 39827240 ~ 39855114 (-)
AMCG00016992 LOC105913228,LOC107691887,LOC107701594,LOC108431596,LOC100331190,LOC107592839 coding upstream 2502198 40888359 ~ 40888580 (-)
G17149 NA non-coding downstream 44986 38340383 ~ 38340835 (-)
G17148 NA non-coding downstream 45946 38339575 ~ 38339875 (-)
G17140 NA non-coding downstream 59784 38325250 ~ 38326037 (-)
G17094 NA non-coding downstream 268566 38089679 ~ 38117255 (-)
G17039 NA non-coding downstream 527297 37858324 ~ 37858524 (-)
G17166 NA non-coding upstream 5509 38391670 ~ 38392072 (-)
G17170 NA non-coding upstream 6920 38393081 ~ 38393320 (-)
G17171 NA non-coding upstream 8340 38394501 ~ 38395819 (-)
G17225 NA non-coding upstream 320923 38707084 ~ 38730835 (-)
G17250 NA non-coding upstream 350392 38736553 ~ 38803571 (-)
AMCG00016959 NA other downstream 326882 37875250 ~ 38058939 (-)
G17032 NA other downstream 627350 37758157 ~ 37758471 (-)
AMCG00016938 NA other downstream 2986791 35395992 ~ 35399030 (-)
G16563 NA other downstream 4277880 34106690 ~ 34107941 (-)
AMCG00016891 limd2,LOC107674139,LOC107658411 other downstream 4872242 33488725 ~ 33513579 (-)
G17421 NA other upstream 2830490 41216651 ~ 41217231 (-)
AMCG00017014 NA other upstream 3550765 41936926 ~ 41938563 (-)
G17842 NA other upstream 4422550 42808711 ~ 42864616 (-)
AMCG00017051 NA other upstream 4562830 42948991 ~ 42974433 (-)
AMCG00017061 NA other upstream 4894076 43280237 ~ 43286603 (-)

Expression


Co-expression Network