Gene
RNA
| Item | Value |
|---|---|
| gene id | G18302 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 45243484 ~ 45243983 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0031290 | retinal ganglion cell axon guidance | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU22699 | True | 500 | lncRNA | 0.33 | 1 | 45243484 | 45243983 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017104 | NA | coding | upstream | 15808 | 45220114 ~ 45227676 (+) |
| AMCG00017103 | NA | coding | upstream | 309235 | 44933056 ~ 44934249 (+) |
| AMCG00017098 | NA | coding | upstream | 319850 | 44902466 ~ 44923634 (+) |
| AMCG00017097 | grm2,LOC105017167,LOC106565576,LOC106583186 | coding | upstream | 351614 | 44881865 ~ 44891870 (+) |
| AMCG00017102 | grm2,LOC106565576 | coding | upstream | 366944 | 44867914 ~ 44876540 (+) |
| AMCG00017113 | NA | coding | downstream | 699067 | 45943050 ~ 46096926 (+) |
| AMCG00017112 | pdzrn3,LOC107584480,LOC107667029,LOC107680714,LOC106582849 | coding | downstream | 985066 | 46229049 ~ 46245266 (+) |
| AMCG00017114 | pdzrn3 | coding | downstream | 1068911 | 46312894 ~ 46327713 (+) |
| AMCG00017121 | NA | coding | downstream | 1169419 | 46413402 ~ 46415356 (+) |
| AMCG00017120 | NA | coding | downstream | 1172414 | 46416397 ~ 46419842 (+) |
| G18255 | NA | non-coding | upstream | 257403 | 44985796 ~ 44986081 (+) |
| G18186 | NA | non-coding | upstream | 529320 | 44623367 ~ 44714164 (+) |
| G18197 | NA | non-coding | upstream | 571614 | 44671292 ~ 44671870 (+) |
| G18196 | usp4 | non-coding | upstream | 572606 | 44669423 ~ 44670878 (+) |
| G18127 | NA | non-coding | upstream | 855535 | 44387443 ~ 44387949 (+) |
| G18316 | NA | non-coding | downstream | 282761 | 45526744 ~ 45527005 (+) |
| G18330 | NA | non-coding | downstream | 538214 | 45782197 ~ 45782467 (+) |
| G18357 | NA | non-coding | downstream | 775358 | 46019341 ~ 46021345 (+) |
| G18363 | NA | non-coding | downstream | 857083 | 46101066 ~ 46101623 (+) |
| G18365 | NA | non-coding | downstream | 861614 | 46105597 ~ 46106518 (+) |
| AMCG00017099 | cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 | other | upstream | 281883 | 44949034 ~ 44961601 (+) |
| G18192 | NA | other | upstream | 587386 | 44654652 ~ 44656098 (+) |
| AMCG00017078 | LOC106565757 | other | upstream | 1105553 | 44126214 ~ 44137931 (+) |
| G17697 | NA | other | upstream | 2845697 | 42391297 ~ 42397787 (+) |
| AMCG00016979 | NA | other | upstream | 5988994 | 39239073 ~ 39254490 (+) |
| AMCG00017167 | NA | other | downstream | 4128039 | 49372022 ~ 49382218 (+) |
| AMCG00017173 | NA | other | downstream | 4158548 | 49402531 ~ 49403845 (+) |
| AMCG00017183 | NA | other | downstream | 4469484 | 49713467 ~ 49727567 (+) |
| G19113 | NA | other | downstream | 5307897 | 50551880 ~ 50552985 (+) |
| G19114 | raf1,LOC108276324 | other | downstream | 5315467 | 50559450 ~ 50563278 (+) |
