G19838


Basic Information

Item Value
gene id G19838
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 53815845 ~ 53816076 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU24615
tgacaataatgacCAAAGCCTGCTGGATTATCCTCCCACGCAGCAGCCTCCCTGCGTGGAGTGCCAGCTGTTAAAGGACATGCGATCCTGCGaggactctgtgtgtgtggacagtgtgcCTGGCCAGCGTTCGGCCAGCGATCCGGGAGCTGCGGTCATTGTGCCGTCGAGGCCCGGCGCTTCAGAGCCGATTCAGGGTCGGGGTGTCAGCCTGCAGCAGCTGAGGGCTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24615 True 232 lncRNA 0.62 1 53815845 53816076

Neighbor

gene id symbol gene type direction distance location
AMCG00017323 NA coding upstream 80870 53722534 ~ 53734975 (+)
AMCG00017319 LOC106566567,LOC105013928,LOC102296397,LOC101473935,LOC102778284,LOC103370863 coding upstream 125939 53674878 ~ 53689906 (+)
AMCG00017314 NA coding upstream 146073 53659498 ~ 53669772 (+)
AMCG00017311 NA coding upstream 308648 53480838 ~ 53507197 (+)
AMCG00017305 NA coding upstream 386784 53419540 ~ 53429061 (+)
AMCG00017330 celsr3,LOC107591847,LOC107679402 coding downstream 1196 53817272 ~ 53821473 (+)
AMCG00017326 celsr3,LOC106566780 coding downstream 14795 53830871 ~ 53834907 (+)
AMCG00017324 NA coding downstream 60510 53876586 ~ 53883504 (+)
AMCG00017335 LOC108435819,LOC108440644,LOC107712078,LOC107721176 coding downstream 197485 54013561 ~ 54033037 (+)
AMCG00017336 NA coding downstream 220438 54036514 ~ 54056665 (+)
G19836 NA non-coding upstream 1858 53813785 ~ 53813987 (+)
G19789 NA non-coding upstream 142031 53671984 ~ 53673814 (+)
G19751 NA non-coding upstream 281971 53452130 ~ 53533874 (+)
G19729 NA non-coding upstream 406545 53408965 ~ 53409300 (+)
G19679 NA non-coding upstream 480461 53306095 ~ 53335384 (+)
G19889 NA non-coding downstream 96742 53912818 ~ 53914877 (+)
G19899 NA non-coding downstream 132682 53948758 ~ 54041033 (+)
G19887 NA non-coding downstream 143387 53959463 ~ 53961838 (+)
G19958 NA non-coding downstream 240784 54056860 ~ 54057920 (+)
G20006 NA non-coding downstream 355139 54171215 ~ 54171423 (+)
AMCG00017325 nckipsd other upstream 10049 53794626 ~ 53805796 (+)
G19829 NA other upstream 23151 53790547 ~ 53792694 (+)
G19754 NA other upstream 279381 53503432 ~ 53536464 (+)
G19683 NA other upstream 476190 53335909 ~ 53339655 (+)
AMCG00017287 NA other upstream 981803 52821061 ~ 52834042 (+)
G19854 NA other downstream 37831 53853907 ~ 53855839 (+)
G19860 NA other downstream 48032 53864108 ~ 53864718 (+)
AMCG00017331 NA other downstream 99049 53915125 ~ 53936482 (+)
G19896 NA other downstream 123461 53939537 ~ 53947618 (+)
G19956 NA other downstream 238724 54054800 ~ 54055175 (+)

Expression


Co-expression Network