AMCG00017394 (LOC106604596,LOC105028255,LOC106611619,LOC103363938,LOC104951404)


Basic Information

Item Value
gene id AMCG00017394
gene name LOC106604596,LOC105028255,LOC106611619,LOC103363938,LOC104951404
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 1438528 ~ 1447581 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017394
gAGTCCCAGCAGAATTCGGCCGATTTCCGGGTTTATGTTGAGAACTACACAAGGAACCCAGATGACCTGAGCCGGAAGCAGATCCGGATATATCAGCTTTACAGCCGGACCACCGGGAAACATGTCCAGATTCTGGGGAAAAAGATCAACGCTAATGGGGACGATGGGGGCAAGTATGCTCTCCTTGTGGTGGAAACAGAGACATTTGGGAGCCACATTCGGATAAAAGGGAAGGAAAGTGGTTACTATATCTGCAtgaacaagaaaggaaaaattaTTGGGAAGctcCAGGGGAGGAATCAGGAGTGTGTCTTTGTGGAGGAAGTTTTGGAAAATAACTACACGGCTCTTGTGTCAGCCAAGTACAAAGGCTGGTACCTGGGTTTTAACAGGAAAGGACGACCCAAAAAAGGTTCCAGGACCCAGCAGAATCAACAAGAAGTCCATTTCATGAAACGACACCCAAAGGGTAAAGTGGACCCACTTCCTGAGTTCCGTTTCACCACGGTTACTAAGCGGACACGTAGGGCAAGACGCTTAAAAGTCAACTCTAACTCTAACTGA

Function

NR:

description
PREDICTED: fibroblast growth factor 18-like isoform X1

GO: NA

KEGG:

id description
K04358 FGF; fibroblast growth factor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017394 True 564 mRNA 0.48 3 1438528 1447581

Neighbor

gene id symbol gene type direction distance location
AMCG00017393 pcgf1,LOC107589114,LOC107710472,LOC107660820 coding downstream 149095 1275232 ~ 1289433 (-)
AMCG00017391 NA coding downstream 501852 935881 ~ 936676 (-)
AMCG00017387 NA coding downstream 968098 360455 ~ 470430 (-)
AMCG00017395 tlx2,LOC106611621,LOC106604594 coding upstream 107947 1555528 ~ 1561186 (-)
AMCG00017396 NA coding upstream 152007 1599588 ~ 1600290 (-)
AMCG00017397 NA coding upstream 153010 1600591 ~ 1601058 (-)
AMCG00017400 NA coding upstream 257365 1704946 ~ 1707277 (-)
AMCG00017401 NA coding upstream 323832 1771413 ~ 1781208 (-)
G89940 NA non-coding downstream 79547 1358684 ~ 1358981 (-)
G89939 NA non-coding downstream 97439 1340872 ~ 1341089 (-)
G89912 NA non-coding downstream 399057 1039272 ~ 1039471 (-)
G89909 nanos1,nano1,LOC105894108,LOC106611616 non-coding downstream 467100 968543 ~ 971428 (-)
G89900 NA non-coding downstream 526880 911396 ~ 911648 (-)
G90017 NA non-coding upstream 380099 1827680 ~ 1831528 (-)
G90066 LOC107678491 non-coding upstream 477627 1925208 ~ 1926851 (-)
G90093 NA non-coding upstream 607258 2054839 ~ 2055363 (-)
G90098 NA non-coding upstream 631459 2079040 ~ 2079244 (-)
G90129 NA non-coding upstream 737804 2185385 ~ 2185739 (-)
AMCG00017384 LOC106911887,LOC104963986 other downstream 1086742 160054 ~ 351786 (-)
G89804 NA other downstream 1332643 105685 ~ 105885 (-)
AMCG00017418 NA other upstream 1154202 2601783 ~ 2615562 (-)
AMCG00017426 NA other upstream 1263721 2711302 ~ 2841894 (-)
G90400 NA other upstream 3095194 4542775 ~ 4544760 (-)
G90501 NA other upstream 3710803 5158384 ~ 5221021 (-)
G90502 NA other upstream 3774892 5222473 ~ 5223047 (-)

Expression


Co-expression Network